RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Kdm3bQ6ZPY7 1562 aa12.48□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Eif3aP23116 1344 aaKnown RBP12.48□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Gnl3lQ6PGG6 577 aaKnown RBP12.48□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Smc5Q8CG46 1101 aaKnown RBP12.48□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Prex2Q3LAC4 1598 aa12.47□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Ccdc173A0JLY1 547 aa12.47□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Kif3aP28741 701 aa12.47□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Wdr7Q920I9 1489 aa12.47□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Sptbn5F6UCX4 1208 aa12.47□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Aldh1l1Q8R0Y6 902 aa12.47□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Tnnt2P50752 301 aa12.46□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Mphosph10Q810V0 681 aaKnown RBP12.46□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Kcnh8P59111 1102 aa12.46□□□□□ -0.41
Ccdc40-201ENSMUST00000035935 Kdm5bQ80Y84 1544 aa12.46□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 A0A1L1SQF0 893 aa12.46□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Hap1O35668 628 aa12.46□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Trim30aP15533 496 aa12.46□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Zkscan1Q8BGS3 561 aaKnown RBP12.46□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Pbrm1Q8BSQ9 1634 aaKnown RBP12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 TefQ9JLC6 301 aa12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Supt6hQ62383 1726 aaKnown RBP12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Gm10471E9Q1C7 252 aa12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Kif21aQ9QXL2 1672 aa12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Nup160Q9Z0W3 1402 aaKnown RBP12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 NinlQ6ZQ12 1394 aa12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Zpr1Q62384 459 aa12.45□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Adcy10Q8C0T9 1614 aa12.44□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 ScaperF8VQ70 1398 aaKnown RBP12.44□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Hmgn5Q9JL35 406 aa12.44□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Q8BT18 775 aa12.44□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Cog6Q8R3I3 657 aa12.44□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Ssh2Q5SW75 1423 aa12.44□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Tubb6Q922F4 447 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 CarsQ9ER72 831 aaKnown RBP12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Abca5Q8K448 1642 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Trappc8E9PWG2 1437 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 GphnQ8BUV3 769 aaKnown RBP12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Naip6Q9JIB6 1403 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Lmo7E9PYF4 1699 aaKnown RBP12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Mug2P28666 1451 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Neurod6P48986 337 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Kiaa0754Q69ZZ9 979 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Maco1Q7TQE6 664 aaKnown RBP12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 HnrnpmQ9D0E1 729 aaKnown RBP12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 PtprgQ05909 1442 aa12.43□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 TmpoQ61033 693 aaKnown RBP12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 InsrP15208 1372 aa12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 PaskQ8CEE6 1383 aa12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Magi3Q9EQJ9 1476 aa12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 TkfcQ8VC30 578 aa12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Idi2Q8BFZ6 227 aa12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Utp3Q9JI13 469 aaKnown RBP12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Sirt1Q923E4 737 aa12.42□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Ppip5k1A2ARP1 1436 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 EzrP26040 586 aaKnown RBP12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Tpm3P21107 285 aaKnown RBP12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Rhot2Q8JZN7 620 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Bicd2Q921C5 820 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Lrrc9Q8CDN9 1456 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Hoxb7P09024 217 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Uspl1Q3ULM6 1089 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 OptnQ8K3K8 584 aa12.41□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Gm21969J3QJZ1 289 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Adgrb2Q8CGM1 1561 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Plekhd1B2RPU2 505 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 PogkQ80TC5 607 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Gcc2Q8CHG3 1679 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Q3UJC8 639 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Tspyl2Q7TQI8 677 aa12.4□□□□□ -0.42
Ccdc40-201ENSMUST00000035935 Sbno1Q689Z5 1390 aa12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Zranb3Q6NZP1 1069 aa12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Arhgef40Q3UPH7 1517 aa12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 PdcQ9QW08 244 aa12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Ythdc2B2RR83 1445 aaKnown RBP12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Cplx1P63040 134 aa12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Gpatch3Q8BIY1 525 aa12.39□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Ubxn4Q8VCH8 506 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Kcnh5Q920E3 988 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Srgap3Q812A2 1099 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Hook1Q8BIL5 728 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Cfap99A0A140LIX9 648 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 CastP51125 788 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Plekhm2Q80TQ5 1018 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 NaspQ99MD9 773 aaKnown RBP12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Tpm1P58771 284 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Q9D9S1 216 aa12.38□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Fkbp4P30416 458 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Bcl2l13P59017 434 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Cnnm1Q0GA42 951 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Cwc27Q3TKY6 469 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Rec8Q8C5S7 591 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Dnajc5bQ9CQ94 199 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Stard3nlQ9DCI3 235 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Stk3Q9JI10 497 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Tmc1Q8R4P5 757 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 TnikP83510 1323 aa12.37□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 CrcpO35427 148 aa12.36□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Slc12a5Q91V14 1138 aa12.36□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 Ggnbp2Q5SV77 696 aa12.36□□□□□ -0.43
Ccdc40-201ENSMUST00000035935 4930572O03RikQ8C5Y0 211 aa12.36□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms