RNA–Protein interactions for RNA: ENSMUST00000034131.9

Vps35-201, Transcript of Vacuolar protein sorting-associated protein 35, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vps35, Length 3,474 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35-201ENSMUST00000034131 AknaQ80VW7 1404 aa16.49■□□□□ 0.23
Vps35-201ENSMUST00000034131 Wdr63B2RY71 923 aa16.49■□□□□ 0.23
Vps35-201ENSMUST00000034131 Ccdc146E9Q9F7 977 aa16.49■□□□□ 0.23
Vps35-201ENSMUST00000034131 PtmsQ9D0J8 101 aaKnown RBP16.49■□□□□ 0.23
Vps35-201ENSMUST00000034131 Tsen2Q6P7W5 460 aa16.49■□□□□ 0.23
Vps35-201ENSMUST00000034131 Fgd6Q69ZL1 1399 aa16.48■□□□□ 0.23
Vps35-201ENSMUST00000034131 Gm9992B2RWK3 458 aa16.48■□□□□ 0.23
Vps35-201ENSMUST00000034131 Unc93aQ710D3 458 aa16.48■□□□□ 0.23
Vps35-201ENSMUST00000034131 Usp40Q8BWR4 1235 aa16.48■□□□□ 0.23
Vps35-201ENSMUST00000034131 KdrP35918 1367 aa16.48■□□□□ 0.23
Vps35-201ENSMUST00000034131 Mapkbp1Q6NS57 1503 aa16.48■□□□□ 0.23
Vps35-201ENSMUST00000034131 Adgrl2Q8JZZ7 1487 aa16.47■□□□□ 0.23
Vps35-201ENSMUST00000034131 Srpk2O54781 681 aaKnown RBP16.47■□□□□ 0.23
Vps35-201ENSMUST00000034131 Fmn2Q9JL04 1578 aa16.47■□□□□ 0.23
Vps35-201ENSMUST00000034131 Sart1Q9Z315 806 aaKnown RBP16.47■□□□□ 0.23
Vps35-201ENSMUST00000034131 Wwc1Q5SXA9 1104 aa16.46■□□□□ 0.23
Vps35-201ENSMUST00000034131 Grpel1Q99LP6 217 aa16.46■□□□□ 0.23
Vps35-201ENSMUST00000034131 Kif4P33174 1231 aa16.46■□□□□ 0.22
Vps35-201ENSMUST00000034131 Kdm4aQ8BW72 1064 aa16.46■□□□□ 0.22
Vps35-201ENSMUST00000034131 Prex2Q3LAC4 1598 aa16.45■□□□□ 0.22
Vps35-201ENSMUST00000034131 Zhx1P70121 873 aa16.45■□□□□ 0.22
Vps35-201ENSMUST00000034131 G3bp1P97855 465 aaKnown RBP16.45■□□□□ 0.22
Vps35-201ENSMUST00000034131 Tmco5bQ80X59 307 aa16.45■□□□□ 0.22
Vps35-201ENSMUST00000034131 Pde4cQ3UEI1 686 aa16.44■□□□□ 0.22
Vps35-201ENSMUST00000034131 Fan1Q69ZT1 1020 aa16.44■□□□□ 0.22
Vps35-201ENSMUST00000034131 Glipr1l2Q9CQ35 332 aa16.44■□□□□ 0.22
Vps35-201ENSMUST00000034131 CatipB9EKE5 520 aa16.43■□□□□ 0.22
Vps35-201ENSMUST00000034131 CastP51125 788 aa16.43■□□□□ 0.22
Vps35-201ENSMUST00000034131 IbtkQ6ZPR6 1352 aaKnown RBP16.43■□□□□ 0.22
Vps35-201ENSMUST00000034131 Spag9Q58A65 1321 aaKnown RBP16.43■□□□□ 0.22
Vps35-201ENSMUST00000034131 Cald1E9QA15 768 aaKnown RBP16.43■□□□□ 0.22
Vps35-201ENSMUST00000034131 Anp32cQ64G17 123 aa16.43■□□□□ 0.22
Vps35-201ENSMUST00000034131 Gprasp1Q5U4C1 1347 aa16.42■□□□□ 0.22
Vps35-201ENSMUST00000034131 Ppip5k2Q6ZQB6 1129 aa16.42■□□□□ 0.22
Vps35-201ENSMUST00000034131 P2rx7Q9Z1M0 595 aa16.42■□□□□ 0.22
Vps35-201ENSMUST00000034131 Edc4Q3UJB9 1406 aaKnown RBP16.41■□□□□ 0.22
Vps35-201ENSMUST00000034131 FanciQ8K368 1330 aa16.41■□□□□ 0.22
Vps35-201ENSMUST00000034131 Ccdc173A0JLY1 547 aa16.41■□□□□ 0.22
Vps35-201ENSMUST00000034131 Pola1P33609 1465 aa16.41■□□□□ 0.22
Vps35-201ENSMUST00000034131 Tulp4Q9JIL5 1547 aa16.41■□□□□ 0.22
Vps35-201ENSMUST00000034131 Chd1lQ9CXF7 900 aa16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 Sall3Q62255 1320 aa16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 Kdm5aQ3UXZ9 1690 aa16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 LifrP42703 1092 aa16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 Zfp251Q6PCX8 632 aa16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 Chmp4bQ9D8B3 224 aaKnown RBP16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 CarsQ9ER72 831 aaKnown RBP16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 Olfml1Q8BSH2 233 aa16.4■□□□□ 0.22
Vps35-201ENSMUST00000034131 Cavin1O54724 392 aa16.39■□□□□ 0.21
Vps35-201ENSMUST00000034131 Gadd45bP22339 160 aa16.39■□□□□ 0.21
Vps35-201ENSMUST00000034131 Tmem132aQ922P8 1018 aa16.38■□□□□ 0.21
Vps35-201ENSMUST00000034131 Gm45140A0A0N4SUM8 220 aa16.38■□□□□ 0.21
Vps35-201ENSMUST00000034131 EngaseQ8BX80 734 aa16.38■□□□□ 0.21
Vps35-201ENSMUST00000034131 Serpina10Q8R121 448 aa16.38■□□□□ 0.21
Vps35-201ENSMUST00000034131 Cgnl1Q6AW69 1298 aa16.38■□□□□ 0.21
Vps35-201ENSMUST00000034131 Ccdc171E9Q1U1 1324 aa16.38■□□□□ 0.21
Vps35-201ENSMUST00000034131 Cep170Q6A065 1588 aa16.37■□□□□ 0.21
Vps35-201ENSMUST00000034131 Iqsec2Q5DU25 1478 aa16.37■□□□□ 0.21
Vps35-201ENSMUST00000034131 Ptgs1P22437 602 aa16.37■□□□□ 0.21
Vps35-201ENSMUST00000034131 Atp2b3Q0VF55 1220 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Gpatch11Q3UFS4 262 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Anapc15-psA0A140T8L6 141 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Ncbp1Q3UYV9 790 aaKnown RBP16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Tbc1d31Q6NXY1 996 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Stac3Q8BZ71 360 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Casc1Q6TDU8 730 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 CenppQ9CZ92 286 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Abca16E9PWJ7 1678 aa16.36■□□□□ 0.21
Vps35-201ENSMUST00000034131 Trim30aP15533 496 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Bach2P97303 839 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Kiaa0754Q69ZZ9 979 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Stk24Q99KH8 431 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Gdpd2Q9ESM6 539 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Nsd2Q8BVE8 1365 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 AnkarA2RT91 1465 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Hvcn1Q3U2S8 269 aa16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Eif4g2Q62448 906 aaKnown RBP16.35■□□□□ 0.21
Vps35-201ENSMUST00000034131 Ncbp3Q8BZR9 615 aaKnown RBP16.34■□□□□ 0.21
Vps35-201ENSMUST00000034131 Cyp27a1Q9DBG1 533 aa16.34■□□□□ 0.21
Vps35-201ENSMUST00000034131 Zdhhc9P59268 364 aa16.34■□□□□ 0.21
Vps35-201ENSMUST00000034131 MvpQ9EQK5 861 aa16.34■□□□□ 0.21
Vps35-201ENSMUST00000034131 Kank4Q6P9J5 1016 aa16.33■□□□□ 0.2
Vps35-201ENSMUST00000034131 Rbm42Q91V81 474 aaKnown RBP16.33■□□□□ 0.2
Vps35-201ENSMUST00000034131 Fam114a1Q9D281 569 aa16.33■□□□□ 0.2
Vps35-201ENSMUST00000034131 Aldh1l1Q8R0Y6 902 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 Adam1bQ8R534 806 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 Irx4Q9QY61 515 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 Cers3Q1A3B0 383 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 HnrnpuQ8VEK3 800 aaKnown RBP16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 Neo1P97798 1493 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 MpndQ3TV65 487 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 Ciz1Q8VEH2 845 aa16.32■□□□□ 0.2
Vps35-201ENSMUST00000034131 Scaf11E9PZM7 1456 aaKnown RBP16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 Cavin4A2AMM0 362 aa16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 Q3UPC7 1272 aa16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 Znf608Q56A10 1511 aa16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 Sass6Q80UK7 654 aa16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 E4f1Q8CCE9 783 aa16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 Abcc6Q9R1S7 1498 aa16.31■□□□□ 0.2
Vps35-201ENSMUST00000034131 EzrP26040 586 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms