RNA–Protein interactions for RNA: ENSMUST00000031327.8

Cxcl1-201, Transcript of Growth-regulated alpha protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cxcl1, Length 953 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1-201ENSMUST00000031327 Cacna1sQ02789 1880 aa15.6■□□□□ 0.09
Cxcl1-201ENSMUST00000031327 Ly75Q60767 1723 aa15.6■□□□□ 0.09
Cxcl1-201ENSMUST00000031327 PaskQ8CEE6 1383 aa15.59■□□□□ 0.09
Cxcl1-201ENSMUST00000031327 HdgfP51859 237 aaKnown RBP15.58■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Rgl3Q3UYI5 709 aa15.58■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 IqubQ8CDK3 788 aa15.58■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Stag3O70576 1240 aa15.56■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Taok3Q8BYC6 898 aa15.55■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Bcl9lQ67FY2 1494 aa15.54■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Dzip1Q8BMD2 852 aa15.54■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Ncapd2Q8K2Z4 1392 aa15.53■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Ppp6r1Q7TSI3 856 aa15.52■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 TimelessQ9R1X4 1197 aa15.52■□□□□ 0.08
Cxcl1-201ENSMUST00000031327 Fer1l6E0CZ42 1862 aa15.51■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Apba2P98084 750 aa15.51■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Mon2Q80TL7 1715 aa15.51■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Pard3Q99NH2 1333 aa15.5■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Sipa1l1Q8C0T5 1782 aa15.5■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Ccer2J3QPU5 274 aa15.5■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Pm20d1Q8C165 503 aa15.5■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Nid2O88322 1403 aa15.5■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Tnrc6bQ8BKI2 1810 aaKnown RBP15.5■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Cdk19Q8BWD8 501 aa15.49■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Usp40Q8BWR4 1235 aa15.49■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Sbno1Q689Z5 1390 aa15.49■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Tet3Q8BG87 1668 aa15.48■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 RalgapbQ8BQZ4 1484 aa15.48■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Ezh2Q61188 746 aaKnown RBP15.48■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Card11Q8CIS0 1159 aa15.48■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Usp47Q8BY87 1376 aa15.47■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Mug2P28666 1451 aa15.46■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Mast2Q60592 1734 aa15.46■□□□□ 0.07
Cxcl1-201ENSMUST00000031327 Cpsf1Q9EPU4 1441 aaKnown RBP15.45■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Gm21698A0A087WQP8 267 aa15.45■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 4930523C07RikE9Q2T4 99 aa15.45■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Gm21671G3UY31 267 aa15.45■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 NktrP30415 1453 aa15.45■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Kcna3P16390 528 aa15.44■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 PsdQ5DTT2 1024 aa15.44■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Zeb2Q9R0G7 1215 aa15.43■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Slx1bQ8BX32 270 aa15.42■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Gm16486A0A1D5RMD1 1434 aa15.42■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 En2P09066 324 aa15.41■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Frmpd2A0A140LI67 1392 aa15.4■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Magea1O89006 320 aa15.4■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Magea5O89009 320 aa15.4■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Magea2Q9R2A2 320 aa15.4■□□□□ 0.06
Cxcl1-201ENSMUST00000031327 Gimap6Q8K349 305 aa15.39■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Astn2Q80Z10 1352 aa15.38■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Rab3gap2Q8BMG7 1366 aa15.38■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Senp3Q9EP97 568 aaKnown RBP15.37■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 GakQ99KY4 1305 aa15.37■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Nphp4P59240 1425 aa15.36■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Kat6bQ8BRB7 1872 aa15.36■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Gsto1O09131 240 aa15.36■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 GalcP54818 684 aa15.36■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Idi2Q8BFZ6 227 aa15.36■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Gpr150Q8BL07 427 aa15.36■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 CatipB9EKE5 520 aa15.35■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Gtf2e1Q9D0D5 440 aa15.35■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Card10P58660 1021 aa15.34■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Vars2Q3U2A8 1060 aa15.34■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Lrit1Q8K099 624 aa15.34■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Zcrb1Q9CZ96 217 aaKnown RBP15.34■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 CenpjQ569L8 1344 aa15.34■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 TonslQ6NZL6 1363 aa15.34■□□□□ 0.05
Cxcl1-201ENSMUST00000031327 Ncoa4Q5U4H9 625 aa15.33■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Map3k19E9Q3S4 1311 aa15.32■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Nwd2Q6P5U7 1742 aa15.31■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Ccdc85cE9Q6B2 420 aa15.31■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Amotl2Q8K371 772 aa15.31■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Snapc4Q8BP86 1333 aa15.31■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Mdc1Q5PSV9 1707 aa15.31■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Akap11E9Q777 1895 aa15.3■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Erbb3Q61526 1339 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Ppfibp2O35711 882 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Vps33bP59016 617 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Eid3Q3V124 375 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Zbtb4Q5F293 982 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Mier1Q5UAK0 511 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Ankrd23Q812A3 306 aa15.29■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 FanciQ8K368 1330 aa15.28■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Ddb1Q3U1J4 1140 aaKnown RBP15.28■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Neurod1Q60867 357 aa15.28■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Gm21190A0A0G2JGJ6 266 aa15.27■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Ubxn2bQ0KL01 331 aa15.27■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Rapgefl1Q68EF8 662 aa15.27■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 RgmbQ7TQ33 436 aa15.27■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Dnajc10Q9DC23 793 aa15.27■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Exosc9Q9JHI7 438 aaKnown RBP15.27■□□□□ 0.04
Cxcl1-201ENSMUST00000031327 Znf335A2A5K6 1337 aa15.26■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Stard8Q8K031 1019 aa15.26■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Uhrf1bp1lA2RSJ4 1457 aa15.26■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 TnrQ8BYI9 1358 aa15.25■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Kcnq2Q9Z351 759 aa15.25■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Nckap5lQ6GQX2 1323 aa15.24■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Ppef1O35655 650 aa15.24■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Hspa5P20029 655 aaKnown RBP15.24■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Pim2Q62070 370 aa15.24■□□□□ 0.03
Cxcl1-201ENSMUST00000031327 Kcnh5Q920E3 988 aa15.24■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms