RNA–Protein interactions for RNA: ENSMUST00000005532.8

Nid1-201, Transcript of Nidogen-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nid1, Length 6,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nid1-201ENSMUST00000005532 Otud6bQ8K2H2 294 aa18.09■□□□□ 0.49
Nid1-201ENSMUST00000005532 CenphQ9QYM8 241 aa18.09■□□□□ 0.49
Nid1-201ENSMUST00000005532 Krt85Q9Z2T6 507 aa18.09■□□□□ 0.49
Nid1-201ENSMUST00000005532 Paf1Q8K2T8 535 aa18.09■□□□□ 0.49
Nid1-201ENSMUST00000005532 Pmfbp1Q9WVQ0 1022 aa18.09■□□□□ 0.49
Nid1-201ENSMUST00000005532 Erlin2Q8BFZ9 340 aa18.09■□□□□ 0.49
Nid1-201ENSMUST00000005532 Cecr2E9Q2Z1 1453 aa18.08■□□□□ 0.49
Nid1-201ENSMUST00000005532 Nsd2Q8BVE8 1365 aa18.08■□□□□ 0.48
Nid1-201ENSMUST00000005532 Tdrd9Q14BI7 1383 aa18.08■□□□□ 0.48
Nid1-201ENSMUST00000005532 Commd10Q8JZY2 202 aa18.08■□□□□ 0.48
Nid1-201ENSMUST00000005532 Phldb2Q8K1N2 1249 aa18.08■□□□□ 0.48
Nid1-201ENSMUST00000005532 Ppp4r3bQ922R5 820 aa18.08■□□□□ 0.48
Nid1-201ENSMUST00000005532 Znf692Q3U381 531 aa18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Nup88Q8CEC0 753 aaKnown RBP18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Prpf4bQ61136 1007 aaKnown RBP18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Spag5Q7TME2 1165 aa18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Jakmip1Q8BVL9 626 aa18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Eif3aP23116 1344 aaKnown RBP18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Ppm1eQ80TL0 749 aa18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Tubb6Q922F4 447 aa18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Ccdc96Q9CR92 584 aa18.07■□□□□ 0.48
Nid1-201ENSMUST00000005532 Puf60Q3UEB3 564 aaKnown RBP18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 OptnQ8K3K8 584 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Smarca2Q6DIC0 1577 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Lrrcc1Q69ZB0 1026 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Znf704Q9ERQ3 566 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Pip4k2aO70172 405 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Samm50Q8BGH2 469 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Syce3B5KM66 88 aa18.06■□□□□ 0.48
Nid1-201ENSMUST00000005532 Fyb1O35601 819 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Apaf1O88879 1249 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Abl1P00520 1123 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Abcd1P48410 736 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Fam184aE9PW83 1143 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Slu7Q8BHJ9 585 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Cbx1P83917 185 aaKnown RBP18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Ccdc181Q80ZU5 509 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Ift140E9PY46 1464 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Lamb3Q61087 1168 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Tango6Q8C3S2 1079 aa18.05■□□□□ 0.48
Nid1-201ENSMUST00000005532 Crybg2B7ZCC2 1516 aa18.04■□□□□ 0.48
Nid1-201ENSMUST00000005532 Agtpbp1Q641K1 1218 aa18.04■□□□□ 0.48
Nid1-201ENSMUST00000005532 Rad54l2Q99NG0 1466 aa18.04■□□□□ 0.48
Nid1-201ENSMUST00000005532 Sycp2Q9CUU3 1500 aa18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 FanciQ8K368 1330 aa18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 Secisbp2lQ6A098 1086 aaKnown RBP18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 CenpqQ9CPQ5 267 aa18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 Cfap58B2RW38 873 aa18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 NcapgE9PWG6 1004 aa18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 Gbp4Q61107 620 aa18.03■□□□□ 0.48
Nid1-201ENSMUST00000005532 Zfp644E9QA22 1323 aa18.02■□□□□ 0.47
Nid1-201ENSMUST00000005532 Erc1Q99MI1 1120 aa18.02■□□□□ 0.47
Nid1-201ENSMUST00000005532 Ccdc83Q9D4V3 305 aa18.02■□□□□ 0.47
Nid1-201ENSMUST00000005532 Dnaaf4Q8R368 420 aa18.01■□□□□ 0.47
Nid1-201ENSMUST00000005532 Tfip11Q9ERA6 838 aaKnown RBP18.01■□□□□ 0.47
Nid1-201ENSMUST00000005532 Slc13a4Q8BZ82 625 aa18.01■□□□□ 0.47
Nid1-201ENSMUST00000005532 Jakmip2D3YXK0 820 aa18■□□□□ 0.47
Nid1-201ENSMUST00000005532 Luc7lQ9CYI4 371 aaKnown RBP18■□□□□ 0.47
Nid1-201ENSMUST00000005532 MicalclQ9D5U9 680 aa18■□□□□ 0.47
Nid1-201ENSMUST00000005532 Cep57l1Q8VDS7 400 aa18■□□□□ 0.47
Nid1-201ENSMUST00000005532 Map9Q3TRR0 646 aa18■□□□□ 0.47
Nid1-201ENSMUST00000005532 Gnl2Q99LH1 728 aaKnown RBP17.99■□□□□ 0.47
Nid1-201ENSMUST00000005532 Larp1Q6ZQ58 1072 aaKnown RBP17.99■□□□□ 0.47
Nid1-201ENSMUST00000005532 Cep89Q9CZX2 791 aa17.99■□□□□ 0.47
Nid1-201ENSMUST00000005532 CarsQ9ER72 831 aaKnown RBP17.99■□□□□ 0.47
Nid1-201ENSMUST00000005532 Stim1P70302 685 aa17.99■□□□□ 0.47
Nid1-201ENSMUST00000005532 Ncapd3Q6ZQK0 1506 aa17.99■□□□□ 0.47
Nid1-201ENSMUST00000005532 LrpprcQ6PB66 1392 aaKnown RBP17.98■□□□□ 0.47
Nid1-201ENSMUST00000005532 Pabpn1Q8CCS6 302 aaKnown RBP17.98■□□□□ 0.47
Nid1-201ENSMUST00000005532 Cdc45Q9Z1X9 566 aa17.98■□□□□ 0.47
Nid1-201ENSMUST00000005532 Cttnbp2B9EJA2 1648 aa17.98■□□□□ 0.47
Nid1-201ENSMUST00000005532 Cwc27Q3TKY6 469 aa17.98■□□□□ 0.47
Nid1-201ENSMUST00000005532 ScribQ80U72 1612 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Eva1cP58659 440 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Plekhg5Q66T02 1073 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Ppp6r1Q7TSI3 856 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Eif5P59325 429 aaKnown RBP17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 MpripP97434 1024 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Srgap3Q812A2 1099 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Cabp2Q9JLK4 216 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Atp2b2Q9R0K7 1198 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Nol8Q3UHX0 1147 aaKnown RBP17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 Myom3A2ABU4 1439 aa17.97■□□□□ 0.47
Nid1-201ENSMUST00000005532 ImpactO55091 318 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Pde4cQ3UEI1 686 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Cpa2Q504N0 417 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Gnl3lQ6PGG6 577 aaKnown RBP17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Ppip5k2Q6ZQB6 1129 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 MvpQ9EQK5 861 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Fsd1Q7TPM6 496 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Rnf187Q8BFX1 236 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 TxlnbQ8VBT1 685 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Dusp27Q148W8 1138 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 TefQ9JLC6 301 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Arglu1Q3UL36 271 aaKnown RBP17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 HypkQ9CR41 129 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 DmtnQ9WV69 405 aa17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Wdr33Q8K4P0 1330 aaKnown RBP17.95■□□□□ 0.46
Nid1-201ENSMUST00000005532 Sel1lQ9Z2G6 790 aa17.94■□□□□ 0.46
Nid1-201ENSMUST00000005532 Rhot2Q8JZN7 620 aa17.94■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms