RNA–Protein interactions for RNA: ENST00000639629.1

CCDC7-215, Transcript of coiled-coil domain containing 7, human

APPRIS ALT2 TSL 5 BASIC

Gene CCDC7, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC7-215	ENST00000639629	CCDC187	A0A096LP49	1063 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMEM247	A6NEH6	219 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	GOLGA6L3	A6NEY3	463 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ASAP2	O43150	1006 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	BCL2L11	O43521	198 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	OFD1	O75665	1012 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	GRP	P07492	148 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	CNP	P09543	421 aa	Known RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	RNF224	P0DH78	156 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ARSA	P15289	507 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	NCL	P19338	710 aa	Known RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TGM2	P21980	687 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	MYF6	P23409	242 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRKCH	P24723	683 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ALDH9A1	P49189	494 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	HTR6	P50406	440 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ZNF135	P52742	658 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	HNRNPK	P61978	463 aa	Known RBP eCLIP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	DSC1	Q08554	894 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SPCS2	Q15005	226 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	FOXR2	Q6PJQ5	311 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ATG9A	Q7Z3C6	839 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SH2D6	Q7Z4S9	175 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	USP38	Q8NB14	1042 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ATP11C	Q8NB49	1132 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	GLIS1	Q8NBF1	620 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	WDR48	Q8TAF3	677 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	OTUD7A	Q8TE49	926 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	COG1	Q8WTW3	980 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TFAP2B	Q92481	460 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	CAVIN3	Q969G5	261 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	KTI12	Q96EK9	354 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMEM41A	Q96HV5	264 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	FBXL20	Q96IG2	436 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PYGO2	Q9BRQ0	406 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	RNF7	Q9UBF6	113 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	HDAC6	Q9UBN7	1215 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SEL1L	Q9UBV2	794 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMA7	Q9Y2S6	64 aa	Known RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMX2	Q9Y320	296 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	NME7	Q9Y5B8	376 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	RGS12	O14924	1447 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ACACB	O00763	2458 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	EPG5	Q9HCE0	2579 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	KDM6B	O15054	1643 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	GREB1L	Q9C091	1923 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	FLG	P20930	4061 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ABCA12	Q86UK0	2595 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	FAM234B	A2RU67	622 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TPP1	O14773	563 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PPM1D	O15297	605 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRKN	O60260	465 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	DAB1	O75553	588 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMEM63A	O94886	807 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PSG1	P11464	419 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	MAOA	P21397	527 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TLX1	P31314	330 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	STAT6	P42226	847 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ARL16	Q0P5N6	197 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SMAD1	Q15797	465 aa	Known RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TDRD12	Q587J7	1177 aa	Known RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SPINK14	Q6IE38	97 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	INO80C	Q6PI98	192 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	C17orf99	Q6UX52	265 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TSHZ1	Q6ZSZ6	1077 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	DGKH	Q86XP1	1220 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	FGFRL1	Q8N441	504 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC38A9	Q8NBW4	561 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SLC22A17	Q8WUG5	538 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	CELF1	Q92879	486 aa	Known RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ARSG	Q96EG1	525 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMX3	Q96JJ7	454 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	ZNF347	Q96SE7	839 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	C17orf80	Q9BSJ5	609 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	SFXN1	Q9H9B4	322 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	FN3KRP	Q9HA64	309 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	LMBRD1	Q9NUN5	540 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	TMEM248	Q9NWD8	314 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PLEKHB1	Q9UF11	243 aa	Predicted RBP	0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	CNTN6	Q9UQ52	1028 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	DLGAP4	Q9Y2H0	992 aa		0.24	□□□□□ -2.37
CCDC7-215	ENST00000639629	PTCH1	Q13635	1447 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	CDC42BPB	Q9Y5S2	1711 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629		A0A0B4J293	547 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	LOC102723971	A0A1B0GUV8	181 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	C5orf60	A6NFR6	353 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	CAPN8	A6NHC0	703 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	LRRC14B	A6NHZ5	514 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FAM90A7P	A6NKC0	464 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FAM90A22P	A8MWA6	464 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FAM90A12P	A8MX19	464 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	FAM90A23P	A8MXZ1	464 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629		F5H0A9	414 aa	Predicted RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	SYT5	O00445	386 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRPF3	O43395	683 aa	Known RBP	0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	PRAMEF4	O60810	478 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	TNFRSF6B	O95407	300 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	CYP21A2	P08686	494 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ARL14EPL	P0DKL9	152 aa		0.23	□□□□□ -2.37
CCDC7-215	ENST00000639629	ZNF23	P17027	643 aa		0.23	□□□□□ -2.37

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