RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 GPATCH2LQ9NWQ4 482 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 STIM2Q9P246 746 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 FZD10Q9ULW2 581 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 AP4E1Q9UPM8 1137 aa15.18■□□□□ 0.02
PNKP-221ENST00000627317 A0A0A0MRY4 1105 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 E9PAM4 449 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 BUB1O43683 1085 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 SPOPO43791 374 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 CACNG3O60359 315 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 BUB1BO60566 1050 aaPredicted RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 HOXD9P28356 352 aaPredicted RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 SLC6A11P48066 632 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 NRLP54845 237 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 KDSRQ06136 332 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 IFI16Q16666 785 aaKnown RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 MPP7Q5T2T1 576 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 ERMARDQ5T6L9 678 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 FBXL22Q6P050 247 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 C14orf80Q86SX3 495 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 CIR1Q86X95 450 aaPredicted RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 CFAP52Q8N1V2 620 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 USP33Q8TEY7 942 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 ATRIPQ8WXE1 791 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 MYEOVQ96EZ4 313 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 C1orf74Q96LT6 269 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 ZNF830Q96NB3 372 aaPredicted RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 EPAS1Q99814 870 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 OSBPL2Q9H1P3 480 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 KCNF1Q9H3M0 494 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 DHX35Q9H5Z1 703 aaKnown RBP15.17■□□□□ 0.02
PNKP-221ENST00000627317 DEC1Q9P2X7 70 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 TRIM10Q9UDY6 481 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 OR12D3Q9UGF7 316 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 DUSP10Q9Y6W6 482 aa15.17■□□□□ 0.02
PNKP-221ENST00000627317 DCHS1Q96JQ0 3298 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 A0A1B0GVM2 712 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 MACROD2A1Z1Q3 448 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 TCAF2A6NFQ2 919 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 KRT86O43790 486 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 SRGAP2O75044 1071 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 TCF4P15884 667 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 FNTBP49356 437 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 NRG1Q02297 640 aaPredicted RBP15.16■□□□□ 0.02
PNKP-221ENST00000627317 SLC25A11Q02978 314 aaKnown RBP15.16■□□□□ 0.02
PNKP-221ENST00000627317 CDH18Q13634 790 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 SMTNL2Q2TAL5 461 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 PREPLQ4J6C6 727 aaPredicted RBP15.16■□□□□ 0.02
PNKP-221ENST00000627317 BOLA3Q53S33 107 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 GRAMD4Q6IC98 578 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 C11orf63Q6NUN7 778 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 SYT13Q7L8C5 426 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 CPNE8Q86YQ8 564 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 PSTKQ8IV42 348 aaKnown RBP15.16■□□□□ 0.02
PNKP-221ENST00000627317 MFN1Q8IWA4 741 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 CARNMT1Q8N4J0 409 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 ZNF557Q8N988 423 aaPredicted RBP15.16■□□□□ 0.02
PNKP-221ENST00000627317 RPLP0P6Q8NHW5 317 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 TPCN2Q8NHX9 752 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 TEKT4Q8WW24 435 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 HSPH1Q92598 858 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 TBC1D31Q96DN5 1066 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 ARHGEF4Q9NR80 690 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 SALL4Q9UJQ4 1053 aa15.16■□□□□ 0.02
PNKP-221ENST00000627317 SMG5Q9UPR3 1016 aaKnown RBP15.16■□□□□ 0.02
PNKP-221ENST00000627317 A0A0U1RQJ8 604 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 HRO43593 1189 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 CREB3O43889 395 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 ATG13O75143 517 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 TULP3O75386 442 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 APODP05090 189 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 KRT7P08729 469 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 IL1R2P27930 398 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 L1CAMP32004 1257 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 SLC1A1P43005 524 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 KIR2DL1P43626 348 aaPredicted RBP15.15■□□□□ 0.02
PNKP-221ENST00000627317 DGKGP49619 791 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 KCNT1Q5JUK3 1230 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 ZFYVE27Q5T4F4 411 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 RWDD4Q6NW29 188 aaKnown RBP15.15■□□□□ 0.02
PNKP-221ENST00000627317 CYP4V2Q6ZWL3 525 aaPredicted RBP15.15■□□□□ 0.02
PNKP-221ENST00000627317 DAAM2Q86T65 1068 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 WDR5BQ86VZ2 330 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 LONP2Q86WA8 852 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 ZNF683Q8IZ20 524 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 PYROXD2Q8N2H3 581 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 IGSF8Q969P0 613 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 PNKPQ96T60 521 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 SLC2A11Q9BYW1 496 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.15■□□□□ 0.02
PNKP-221ENST00000627317 PPP2R2CQ9Y2T4 447 aa15.15■□□□□ 0.02
PNKP-221ENST00000627317 SPTBN4Q9H254 2564 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 IGLV3-10A0A075B6K4 115 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 CCDC163A0A0D9SF12 145 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 FAM72CH0Y354 149 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 H0Y626 953 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 CLDN11O75508 207 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 LRIG2O94898 1065 aa15.14■□□□□ 0.01
PNKP-221ENST00000627317 LUC7L3O95232 432 aaKnown RBP15.14■□□□□ 0.01
PNKP-221ENST00000627317 KAT7O95251 611 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms