RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, human

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRCA1-229	ENST00000621897	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	FOXO6	A8MYZ6	492 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	CYP3A7	P24462	503 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	CDKN2A	P42771	156 aa	Known RBP	4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	RNASEL	Q05823	741 aa	Known RBP	4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	ERV3-1	Q14264	604 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	SPARCL1	Q14515	664 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	ARL13A	Q5H913	290 aa	Predicted RBP	4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	GGT6	Q6P531	493 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	LVRN	Q6Q4G3	990 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	GATAD2A	Q86YP4	633 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	ACRBP	Q8NEB7	543 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	FAM71B	Q8TC56	605 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	WASF1	Q92558	559 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	INPP5D	Q92835	1189 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	SORBS1	Q9BX66	1292 aa	Known RBP	4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	HIPK2	Q9H2X6	1198 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	MAP6D1	Q9H9H5	199 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	CNTN6	Q9UQ52	1028 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	LZTS1	Q9Y250	596 aa		4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	COPG1	Q9Y678	874 aa	Known RBP	4.91	□□□□□ -1.62
BRCA1-229	ENST00000621897	TBC1D3D	A0A087WVF3	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3I	A0A087WXS9	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3E	A0A087X179	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3K	A0A087X1G2	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3B	A6NDS4	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3F	A6NER0	549 aa	Predicted RBP	4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	GOLGA6L3	A6NEY3	463 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	LGALS16	A8MUM7	142 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3L	B9A6J9	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	GTPBP1	O00178	669 aa	Known RBP	4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	NEURL1	O76050	574 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3H	P0C7X1	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBXAS1	P24557	533 aa	Predicted RBP	4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	ARRB2	P32121	409 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	RBM6	P78332	1123 aa	Known RBP	4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	BTK	Q06187	659 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	SEMA3A	Q14563	771 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TRIM60	Q495X7	471 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	KLHL22	Q53GT1	634 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3G	Q6DHY5	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3C	Q6IPX1	549 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TMEM88	Q6PEY1	159 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	TBC1D3	Q8IZP1	549 aa	Predicted RBP	4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	SVIP	Q8NHG7	77 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	ARFGAP3	Q9NP61	516 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	NFU1	Q9UMS0	254 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	CKAP5	Q14008	2032 aa		4.9	□□□□□ -1.63
BRCA1-229	ENST00000621897	AGAP5	A6NIR3	686 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	MCIDAS	D6RGH6	385 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	TNFRSF13B	O14836	293 aa	Predicted RBP	4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	MDM4	O15151	490 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	IFNA2	P01563	188 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	ZBTB16	Q05516	673 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	GALNT1	Q10472	559 aa	Predicted RBP	4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	GALNT3	Q14435	633 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	ENTPD8	Q5MY95	495 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	TTC39A	Q5SRH9	613 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	C10orf76	Q5T2E6	689 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	KIAA1161	Q6NSJ0	714 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	KIAA1324	Q6UXG2	1013 aa	Known RBP	4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	HMGB4	Q8WW32	186 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	LPAR1	Q92633	364 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	CENPI	Q92674	756 aa	Predicted RBP	4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	FRMD8	Q9BZ67	464 aa	Predicted RBP	4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	ZNF304	Q9HCX3	659 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897	TNFSF13B	Q9Y275	285 aa		4.89	□□□□□ -1.63
BRCA1-229	ENST00000621897		A0A087WV62	115 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	KCNJ18	B7U540	433 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	FFAR2	O15552	330 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	MSI1	O43347	362 aa	Known RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	IFIT2	P09913	472 aa	Known RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	PDIA3	P30101	505 aa	Known RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	HOXA11	P31270	313 aa	Predicted RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	ADPRH	P54922	357 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	PMPCA	Q10713	525 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	PTK2B	Q14289	1009 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	ZNF569	Q5MCW4	686 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	SYCP2L	Q5T4T6	812 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	UBAP2	Q5T6F2	1119 aa	Known RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	KDELC2	Q7Z4H8	507 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	ZNF419	Q96HQ0	510 aa	Predicted RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	ZNF479	Q96JC4	524 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	TMEM120A	Q9BXJ8	343 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	RBM38	Q9H0Z9	239 aa	Known RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	MAGEH1	Q9H213	219 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	SIRT3	Q9NTG7	399 aa	Predicted RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	INSL5	Q9Y5Q6	135 aa		4.88	□□□□□ -1.63
BRCA1-229	ENST00000621897	MBD3L5	A6NJ08	208 aa	Predicted RBP	4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	HEXIM1	O94992	359 aa	Known RBP	4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	LARGE1	O95461	756 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	PLA2G2A	P14555	144 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	PGGT1B	P53609	377 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	PNLIPRP1	P54315	467 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	PFKFB4	Q16877	469 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	LIN54	Q6MZP7	749 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	CTU1	Q7Z7A3	348 aa	Known RBP	4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	TMEM217	Q8N7C4	229 aa		4.87	□□□□□ -1.63
BRCA1-229	ENST00000621897	ZNF527	Q8NB42	609 aa		4.87	□□□□□ -1.63

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