RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 MAGEA12P43365 314 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 GRAMD1BQ3KR37 738 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 GRTP1Q5TC63 336 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 ZNF567Q8N184 647 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 LINC01465Q8N7H1 131 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 CCNYQ8ND76 341 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 NLRP7Q8WX94 980 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 TUBGCP4Q9UGJ1 667 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 FZD10Q9ULW2 581 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 USP2O75604 605 aaPredicted RBP20.88■□□□□ 0.93
NEK3-208ENST00000618534 ABCG1P45844 678 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 IRF9Q00978 393 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 BST2Q10589 180 aaKnown RBP20.88■□□□□ 0.93
NEK3-208ENST00000618534 PDK3Q15120 406 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 ZNF484Q5JVG2 852 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 GJC2Q5T442 439 aaPredicted RBP20.88■□□□□ 0.93
NEK3-208ENST00000618534 NT5DC4Q86YG4 428 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 ZMAT2Q96NC0 199 aaKnown RBP20.88■□□□□ 0.93
NEK3-208ENST00000618534 OR52B2Q96RD2 323 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 RBBP8Q99708 897 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.88■□□□□ 0.93
NEK3-208ENST00000618534 UTRNP46939 3433 aa20.88■□□□□ 0.93
NEK3-208ENST00000618534 KLHL33A6NCF5 533 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 SERPINB8P50452 374 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 DYNC1I2Q13409 638 aaKnown RBP20.87■□□□□ 0.93
NEK3-208ENST00000618534 DLG2Q15700 870 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 ANKRD20A4Q4UJ75 823 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 SPANXN3Q5MJ09 141 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 ARHGAP17Q68EM7 881 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 DLK2Q6UY11 383 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 TP53INP2Q8IXH6 220 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 OR52K1Q8NGK4 314 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 NDRG1Q92597 394 aaKnown RBP20.87■□□□□ 0.93
NEK3-208ENST00000618534 ZNF669Q96BR6 464 aaPredicted RBP20.87■□□□□ 0.93
NEK3-208ENST00000618534 KCNK16Q96T55 309 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 RTKNQ9BST9 563 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 CAB39LQ9H9S4 337 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 INPP5FQ9Y2H2 1132 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 G3V2L1 256 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 PDGFRBP09619 1106 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 PABPC4LP0CB38 370 aaKnown RBP20.87■□□□□ 0.93
NEK3-208ENST00000618534 GLUD2P49448 558 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 MAP3K21Q5TCX8 1036 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 STRA8Q7Z7C7 330 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 ISL2Q96A47 359 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 LENG8Q96PV6 779 aaPredicted RBP20.87■□□□□ 0.93
NEK3-208ENST00000618534 AGAP2Q99490 1192 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 PRDM12Q9H4Q4 367 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 RNF19AQ9NV58 838 aa20.87■□□□□ 0.93
NEK3-208ENST00000618534 CAPN8A6NHC0 703 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 USP12O75317 370 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 SERPINB5P36952 375 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 SULT1E1P49888 294 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 BCAT1P54687 386 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 PITX1P78337 314 aaPredicted RBP20.86■□□□□ 0.93
NEK3-208ENST00000618534 IFRD2Q12894 506 aaPredicted RBP20.86■□□□□ 0.93
NEK3-208ENST00000618534 FSTL4Q6MZW2 842 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 UGT2A3Q6UWM9 527 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 STRADAQ7RTN6 431 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 SDCCAG8Q86SQ7 713 aaPredicted RBP20.86■□□□□ 0.93
NEK3-208ENST00000618534 NME8Q8N427 588 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 TDRD5Q8NAT2 981 aaKnown RBP20.86■□□□□ 0.93
NEK3-208ENST00000618534 ICA1LQ8NDH6 482 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 RNF139Q8WU17 664 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 C18orf25Q96B23 403 aaPredicted RBP20.86■□□□□ 0.93
NEK3-208ENST00000618534 GCNAQ96QF7 691 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 ADAM28Q9UKQ2 775 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 SSX2IPQ9Y2D8 614 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 SLC4A7Q9Y6M7 1214 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 PAPPA2Q9BXP8 1791 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 SYNJ2BP-COX16A0A087WUM0 186 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 GOLGA8QA0A0J9YX86 632 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 GOLGA8OA6NCC3 632 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 GOLGA8NF8WBI6 632 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 GRM5P41594 1212 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 RPS6KA3P51812 740 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 LIMK2P53671 638 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 FOLH1Q04609 750 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 OGFRL1Q5TC84 451 aaPredicted RBP20.86■□□□□ 0.93
NEK3-208ENST00000618534 ANKRD52Q8NB46 1076 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 MOCOSQ96EN8 888 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 AGAP3Q96P47 875 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 TXNRD2Q9NNW7 524 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 COX16Q9P0S2 106 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 DTNAQ9Y4J8 743 aa20.86■□□□□ 0.93
NEK3-208ENST00000618534 A0A096LPK6 155 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.85■□□□□ 0.93
NEK3-208ENST00000618534 PEX1O43933 1283 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 LTFP02788 710 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 LGALS2P05162 132 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 CYP2C8P10632 490 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 SPRP35270 261 aaPredicted RBP20.85■□□□□ 0.93
NEK3-208ENST00000618534 ALDH1A3P47895 512 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 CHN2P52757 468 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 GLRA4Q5JXX5 417 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 SATL1Q86VE3 508 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 DEFB106AQ8N104 65 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 HAPLN3Q96S86 360 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 TCF7L2Q9NQB0 619 aa20.85■□□□□ 0.93
NEK3-208ENST00000618534 ACSS2Q9NR19 701 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms