RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 CLOCKO15516 846 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 DEAF1O75398 565 aaPredicted RBP12.54□□□□□ -0.4
MATR3-227ENST00000618441 AGR2O95994 175 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 SLC1A6P48664 564 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 GRIK5Q16478 980 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 MGAT5BQ3V5L5 792 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.54□□□□□ -0.4
MATR3-227ENST00000618441 DCUN1D2Q6PH85 259 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.54□□□□□ -0.43e-8■■■■□ 19.9
MATR3-227ENST00000618441 ANKK1Q8NFD2 765 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 LRRN4Q8WUT4 740 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 OLFM1Q99784 485 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 NUDT5Q9UKK9 219 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 SLC8A2Q9UPR5 921 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 LRRC37A3O60309 1634 aa12.54□□□□□ -0.4
MATR3-227ENST00000618441 PHGDHO43175 533 aaKnown RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 CD1EP15812 388 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 PRDX6P30041 224 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 GMPRP36959 345 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 RAB15P59190 212 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SLC35G1Q2M3R5 365 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 LYSMD3Q7Z3D4 306 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ADCK1Q86TW2 530 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 KYQ8NBH2 561 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ADPRHL2Q9NX46 363 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 GTF3C4Q9UKN8 822 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 MAGED2Q9UNF1 606 aaPredicted RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 A0A0B4J203 849 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 TTC34A8MYJ7 566 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 CLDN25C9JDP6 229 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 UBL4AP11441 157 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ADGRD1Q6QNK2 874 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 FIP1L1Q6UN15 594 aaKnown RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 MFSD7Q6UXD7 560 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 JAZF1Q86VZ6 243 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 TDRPQ86YL5 185 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 RHOT1Q8IXI2 618 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 TNS4Q8IZW8 715 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 MOCOSQ96EN8 888 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SLC10A4Q96EP9 437 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 VPS35Q96QK1 796 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ZC4H2Q9NQZ6 224 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SNTG2Q9NY99 539 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 PKD2L1Q9P0L9 805 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SCAF8Q9UPN6 1271 aaKnown RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 KCPQ6ZWJ8 1503 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 H0Y858 1186 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 RAD51BO15315 384 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SNRPAP09012 282 aaKnown RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 ME2P23368 584 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ATP2B4P23634 1241 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 PTGS2P35354 604 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ACOT2P49753 483 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 TUBA4AP68366 448 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SIM2Q14190 667 aaPredicted RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 C15orf59Q2T9L4 293 aaPredicted RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 ZIK1Q3SY52 487 aaPredicted RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 ANKS1BQ7Z6G8 1248 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 FAM71DQ8N9W8 422 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 ACSS3Q9H6R3 686 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 IL1RL2Q9HB29 575 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 FANCEQ9HB96 536 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 HMG20AQ9NP66 347 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 DCP1AQ9NPI6 582 aaPredicted RBP12.53□□□□□ -0.4
MATR3-227ENST00000618441 PCDHGA11Q9Y5H2 935 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 CCDC162PA2VCL2 907 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SNTNA6NMZ2 147 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 M0R3G1 203 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SULT1C4O75897 302 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 FDX1P10109 184 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 FXR2P51116 673 aaKnown RBP eCLIP12.53□□□□□ -0.48e-7■■■■□ 22.2
MATR3-227ENST00000618441 FPGSQ05932 587 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 MAPKAPK5Q8IW41 473 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 PI4K2AQ9BTU6 479 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 CD209Q9NNX6 404 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 VTI1BQ9UEU0 232 aa12.53□□□□□ -0.4
MATR3-227ENST00000618441 MRC1P22897 1456 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 TLR3O15455 904 aaKnown RBP12.52□□□□□ -0.4
MATR3-227ENST00000618441 MMP10P09238 476 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 MARSP56192 900 aaKnown RBP12.52□□□□□ -0.4
MATR3-227ENST00000618441 NFATC3Q12968 1075 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 MORF4L2Q15014 288 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 DSELQ8IZU8 1212 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 DCAKDQ8WVC6 231 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 FBXL20Q96IG2 436 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 IL12RB2Q99665 862 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 NPAS2Q99743 824 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.4
MATR3-227ENST00000618441 PRKAG2Q9UGJ0 569 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 ASTN1O14525 1302 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 ZNF536O15090 1300 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.4
MATR3-227ENST00000618441 TCRBV9S1A1TA0A576 114 aa12.52□□□□□ -0.41
MATR3-227ENST00000618441 SDR42E2A6NKP2 422 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms