RNA–Protein interactions for RNA: ENST00000612277.4

HLCS-207, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HLCS, Length 6,112 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-207ENST00000612277 SNRNP35Q16560 246 aaKnown RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 ZIK1Q3SY52 487 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 RBM20Q5T481 1227 aaKnown RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 AADATQ8N5Z0 425 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ACSF2Q96CM8 615 aaPredicted RBP12.63□□□□□ -0.39
HLCS-207ENST00000612277 SLC4A9Q96Q91 983 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 ARMCX1Q9P291 453 aa12.63□□□□□ -0.39
HLCS-207ENST00000612277 CRTAMO95727 393 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 MT-CO1P00395 513 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 PRLRP16471 622 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 ITGALP20701 1170 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 C15orf59Q2T9L4 293 aaPredicted RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 CYB5R4Q7L1T6 521 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 ATP6V0D2Q8N8Y2 350 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 ACTRT1Q8TDG2 376 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 REPS1Q96D71 796 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 PHF12Q96QT6 1004 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 RPS6KA6Q9UK32 745 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 MYOM2P54296 1465 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 ERN1O75460 977 aaKnown RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 OR7A10O76100 309 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 HIST1H2ABP04908 130 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 IFNA6P05013 189 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 FGFR2P21802 821 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 RNF44Q7L0R7 432 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 HIST3H2AQ7L7L0 130 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 DAW1Q8N136 415 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 PDPRQ8NCN5 879 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 OR56A4Q8NGH8 313 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 HIST1H2ACQ93077 130 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 COPS4Q9BT78 406 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 MID1IP1Q9NPA3 183 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 PIH1D3Q9NQM4 214 aaKnown RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 BIVM-ERCC5R4GMW8 1640 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 PLIN3O60664 434 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 NUDT14O95848 222 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 CCNE2O96020 404 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 GCLCP48506 637 aaPredicted RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 ILF2Q12905 390 aaKnown RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 BMPR2Q13873 1038 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 PDK2Q15119 407 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 FAM187BQ17R55 369 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 HMBOX1Q6NT76 420 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 TTC7BQ86TV6 843 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 SCAIQ8N9R8 606 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 MAGEB10Q96LZ2 347 aaPredicted RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 TMEM8AQ9HCN3 771 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 AFF2P51816 1311 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 ERI2A8K979 691 aaKnown RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 RIPK2O43353 540 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 RGS14O43566 566 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 RHOBTB3O94955 611 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 KLK7P49862 253 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 COPZ1P61923 177 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 UBA3Q8TBC4 463 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 AKAP1Q92667 903 aaKnown RBP eCLIP12.62□□□□□ -0.39
HLCS-207ENST00000612277 EZH1Q92800 747 aaPredicted RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 KAT2BQ92831 832 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 SPATA33Q96N06 139 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 L2HGDHQ9H9P8 463 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 KCNK4Q9NYG8 393 aa12.62□□□□□ -0.39
HLCS-207ENST00000612277 RABL2AQ9UBK7 228 aaPredicted RBP12.62□□□□□ -0.39
HLCS-207ENST00000612277 ARPC4-TTLL3A0A0A6YYG9 625 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 PRH1P02810 166 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 POLD2P49005 469 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 MGAT5Q09328 741 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 SV2CQ496J9 727 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 TFDP3Q5H9I0 405 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 AFTPHQ6ULP2 937 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 SLC20A1Q8WUM9 679 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ATG4AQ8WYN0 398 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CST11Q9H112 138 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 NKIRAS2Q9NYR9 191 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CCDC167Q9P0B6 97 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 IRGMA1A4Y4 181 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 TRIM64CA6NLI5 447 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 USP17L10C9JJH3 530 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 WRBO00258 174 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 UQCRBP14927 111 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 NCK1P16333 377 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CYP2A7P20853 494 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 GPR15P49685 360 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 SKIV2LQ15477 1246 aaKnown RBP12.61□□□□□ -0.39
HLCS-207ENST00000612277 TBCDQ9BTW9 1192 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 MARK1Q9P0L2 795 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 SHOC2Q9UQ13 582 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ABLIM1O14639 778 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CASKO14936 926 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 CD4P01730 458 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 ADSLP30566 484 aaPredicted RBP12.61□□□□□ -0.39
HLCS-207ENST00000612277 CACNB3P54284 484 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 MTAPQ13126 283 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 RNASE12Q5GAN4 147 aaKnown RBP12.61□□□□□ -0.39
HLCS-207ENST00000612277 KLHDC7AQ5VTJ3 777 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 SMIM5Q71RC9 77 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 TBC1D10CQ8IV04 446 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 BBS4Q96RK4 519 aa12.61□□□□□ -0.39
HLCS-207ENST00000612277 LY9Q9HBG7 655 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms