RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 WDR18Q9BV38 432 aa15.95■□□□□ 0.14
TNXB-208ENST00000611016 TRPC4Q9UBN4 977 aa15.95■□□□□ 0.14
TNXB-208ENST00000611016 ZNF839A8K0R7 811 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 E9PBE3 544 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 MEIS2O14770 477 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 KLHL41O60662 606 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 MAFO75444 373 aaPredicted RBP15.94■□□□□ 0.14
TNXB-208ENST00000611016 VAPBO95292 243 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 RAD23AP54725 363 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 TRMT5Q32P41 509 aaKnown RBP15.94■□□□□ 0.14
TNXB-208ENST00000611016 SETMARQ53H47 684 aaPredicted RBP15.94■□□□□ 0.14
TNXB-208ENST00000611016 WDR59Q6PJI9 974 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 SMIM22K7EJ46 135 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 RAD51BO15315 384 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 POLR2LP62875 67 aaKnown RBP15.94■□□□□ 0.14
TNXB-208ENST00000611016 KCNT2Q6UVM3 1135 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 FIBCD1Q8N539 461 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 KCNMB3Q9NPA1 279 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 MROH2AA6NES4 1674 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 MT-CO1P00395 513 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 PSMC3P17980 439 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 CD52P31358 61 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 CDK7P50613 346 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 SCARA3Q6AZY7 606 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 ZNF470Q6ECI4 717 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 EIF1ADQ8N9N8 165 aaKnown RBP15.94■□□□□ 0.14
TNXB-208ENST00000611016 MTMR8Q96EF0 704 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 USE1Q9NZ43 259 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 NDOR1Q9UHB4 597 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 MTA2O94776 668 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 MMRN1Q13201 1228 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 RAD21L1Q9H4I0 556 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 CAAP1Q9H8G2 361 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 ZNF711Q9Y462 761 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 PCDHA3Q9Y5H8 950 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 SARSP49591 514 aaKnown RBP15.94■□□□□ 0.14
TNXB-208ENST00000611016 TREML2Q5T2D2 321 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 SPATA20Q8TB22 786 aa15.94■□□□□ 0.14
TNXB-208ENST00000611016 DDX3XO00571 662 aaKnown RBP eCLIP15.93■□□□□ 0.144e-6■■■■■ 27.3
TNXB-208ENST00000611016 H2AFXP16104 143 aaPredicted RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 PTPN4P29074 926 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 SERPINB3P29508 390 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 CCDC142Q17RM4 750 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 CCDC81Q6ZN84 652 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 CPNE1Q99829 537 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 FTHL17Q9BXU8 183 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 NMRAL1Q9HBL8 299 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 COMMD8Q9NX08 183 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 TAS2R13Q9NYV9 303 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 CYP7B1O75881 506 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 ZNF682O95780 498 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 GUCA1AP43080 201 aaPredicted RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 RPS7P62081 194 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 NCF4Q15080 339 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 HECTD3Q5T447 861 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 RAP1GAP2Q684P5 730 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 ZCCHC8Q6NZY4 707 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 PLPPR4Q7Z2D5 763 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 UNC93AQ86WB7 457 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 LENG9Q96B70 501 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 SMAD5Q99717 465 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 ASAH2Q9NR71 780 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 KRT84Q9NSB2 600 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 KCNMA1Q12791 1236 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 RGL4Q8IZJ4 473 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 ATXN2LQ8WWM7 1075 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 OMDQ99983 421 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 MMADHCQ9H3L0 296 aaPredicted RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 SH3BP4Q9P0V3 963 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 DNMT3LQ9UJW3 386 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 PAIP2BQ9ULR5 123 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 ST3GAL5Q9UNP4 418 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 MAPRE3Q9UPY8 281 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 CAPN15O75808 1086 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 BAIAP3O94812 1187 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 CALCAP01258 141 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 FMO4P31512 558 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 NOS2P35228 1153 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 HIRAP54198 1017 aaPredicted RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 CYB5D1Q6P9G0 228 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 FBXO39Q8N4B4 442 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 WNT8BQ93098 351 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 NLNQ9BYT8 704 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 POLR1EQ9GZS1 481 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 SYBUQ9NX95 663 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 DNALI1O14645 258 aaPredicted RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 ABCB1P08183 1280 aaPredicted RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 HDCP19113 662 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 SERPINA4P29622 427 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 PPP3CAQ08209 521 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 ZC3H12AQ5D1E8 599 aaKnown RBP15.93■□□□□ 0.14
TNXB-208ENST00000611016 PDPK2PQ6A1A2 396 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 GRIN3AQ8TCU5 1115 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 C1QTNF7Q9BXJ2 289 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 PARVBQ9HBI1 364 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 KLHL28Q9NXS3 571 aa15.93■□□□□ 0.14
TNXB-208ENST00000611016 ZW10O43264 779 aa15.92■□□□□ 0.14
TNXB-208ENST00000611016 SERPINE1P05121 402 aa15.92■□□□□ 0.14
TNXB-208ENST00000611016 ZNF23P17027 643 aa15.92■□□□□ 0.14
TNXB-208ENST00000611016 NPR3P17342 541 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms