RNA–Protein interactions for RNA: ENST00000610583.1

PCDHGA6-202, Transcript of protocadherin gamma subfamily A, 6, humanhuman

APPRIS P1 BASIC

Gene PCDHGA6, Length 5,650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-202ENST00000610583 HOXB8P17481 243 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CSTF3Q12996 717 aaKnown RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 HYIQ5T013 277 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 RAP1GAP2Q684P5 730 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CCT7Q99832 543 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CCDC3Q9BQI4 270 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 A0A0A0MRY4 1105 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 USP1O94782 785 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CYP1A1P04798 512 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 DARSP14868 501 aaKnown RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 FUT2Q10981 343 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 RCN1Q15293 331 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 DUSP28Q4G0W2 176 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 PHF13Q86YI8 300 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 SPATA13Q96N96 652 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 MIEF1Q9NQG6 463 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 VTI1BQ9UEU0 232 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 PADI4Q9UM07 663 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 SLIT3O75094 1523 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 TRAV19A0A0A6YYK7 116 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 SLC9A3R1O14745 358 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 KATNA1O75449 491 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 BAIAP3O94812 1187 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 ZNF23P17027 643 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 FMO1Q01740 532 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 ANKS6Q68DC2 871 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 DCLRE1AQ6PJP8 1040 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 MTSS1LQ765P7 747 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 RD3Q7Z3Z2 195 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 MIER2Q8N344 545 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 SNRNP25Q9BV90 132 aaKnown RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 MT-CO1P00395 513 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 IFNA14P01570 189 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 FAAP100Q0VG06 881 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 ECM1Q16610 540 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 TMEM154Q6P9G4 183 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 ABHD15Q6UXT9 468 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 C11orf74Q86VG3 221 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 TSPAN18Q96SJ8 248 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 NOD2Q9HC29 1040 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 THAP1Q9NVV9 213 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 SAE1Q9UBE0 346 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 NCKAP1Q9Y2A7 1128 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CHADO15335 359 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 ZSCAN5DPP0CG00 497 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CSH1P0DML2 217 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CSH2P0DML3 217 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 SNHG28P0DPA3 235 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CORO7P57737 925 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 ZNF844Q08AG5 666 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 MAD2L1Q13257 205 aaPredicted RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 USP41Q3LFD5 358 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 USP45Q70EL2 814 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 LRRC52Q8N7C0 313 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 CDHR5Q9HBB8 845 aa14.39□□□□□ -0.11
PCDHGA6-202ENST00000610583 EPHB6O15197 1021 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 HDCP19113 662 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 RRM2P31350 389 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 S100A5P33763 92 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 BLVRAP53004 296 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 CDK16Q00536 496 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 GRIK3Q13003 919 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 MMRN1Q13201 1228 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 AADACL2Q6P093 401 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 NPNTQ6UXI9 565 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 TMCO5AQ8N6Q1 288 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 SUSD6Q92537 303 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 DPY30Q9C005 99 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 IL22Q9GZX6 179 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 TMCC3Q9ULS5 477 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 COL1A2P08123 1366 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 C3P01024 1663 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 FMO4P31512 558 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 RUNX1T1Q06455 604 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 FAM110CQ1W6H9 321 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 CCDC157Q569K6 752 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 TTC33Q6PID6 262 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 ANKRD23Q86SG2 305 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 C10orf53Q8N6V4 93 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 ZNF614Q8N883 585 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 ZNF513Q8N8E2 541 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 OR56A4Q8NGH8 313 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 MFSD14AQ96MC6 490 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 MID1IP1Q9NPA3 183 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 NR2E3Q9Y5X4 410 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 PTCH2Q9Y6C5 1203 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 NCANO14594 1321 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 H3BQF6 201 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 TGFB1I1O43294 461 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 DEAF1O75398 565 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 PSMB4P28070 264 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 CENPAP49450 140 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 ALDH6A1Q02252 535 aaKnown RBP14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 SHROOM1Q2M3G4 852 aaPredicted RBP14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.38□□□□□ -0.11
PCDHGA6-202ENST00000610583 KRCC1Q9NPI7 259 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms