RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 CDO1Q16878 200 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 MAP7D1Q3KQU3 841 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 PLK5Q496M5 336 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 ALFQ53S48 1182 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 PITRM1Q5JRX3 1037 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 CEP68Q76N32 757 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 ZNF366Q8N895 744 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 UCMAQ8WVF2 138 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 SYN2Q92777 582 aaPredicted RBP13.15□□□□□ -0.3
CD9-212ENST00000610354 RPRD1AQ96P16 312 aaPredicted RBP13.15□□□□□ -0.3
CD9-212ENST00000610354 SELENOOQ9BVL4 669 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 MTG2Q9H4K7 406 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 PARD6AQ9NPB6 346 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 NUP205Q92621 2012 aa13.15□□□□□ -0.3
CD9-212ENST00000610354 TNRC6BQ9UPQ9 1833 aaKnown RBP13.15□□□□□ -0.3
CD9-212ENST00000610354 CHD5Q8TDI0 1954 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 IGLV3-10A0A075B6K4 115 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 A0A1B0GVM2 712 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 TCAF2A6NFQ2 919 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 H0Y626 953 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 NPC1O15118 1278 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 CCP110O43303 1012 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 ALDH1A2O94788 518 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 FTLP02792 175 aaPredicted RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 DLDP09622 509 aaKnown RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 GZMAP12544 262 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 POLR2EP19388 210 aaKnown RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 GPD1P21695 349 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 SDC4P31431 198 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 CASP14P31944 242 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 ADRA1BP35368 520 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 PLK1P53350 603 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 COPAP53621 1224 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 CDH18Q13634 790 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 PLEKHG6Q3KR16 790 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 RABGAP1LQ5R372 815 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 LAIR1Q6GTX8 287 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 PLEKHA7Q6IQ23 1121 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 SDE2Q6IQ49 451 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 DNAJC24Q6P3W2 148 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.313e-7■■■■□ 24.8
CD9-212ENST00000610354 STRADAQ7RTN6 431 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 FAM172AQ8WUF8 416 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 RUBCNQ92622 972 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 VCPIP1Q96JH7 1222 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 ZC3H10Q96K80 434 aaKnown RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 MRGPRX1Q96LB2 322 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 C1orf74Q96LT6 269 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 MCEEQ96PE7 176 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 HAPLN3Q96S86 360 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 TRIM7Q9C029 511 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 MKRN2Q9H000 416 aaKnown RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 ISCUQ9H1K1 167 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 KIAA1522Q9P206 1035 aaPredicted RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 ZNF212Q9UDV6 495 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 OR51B4Q9Y5P0 310 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 NUMA1Q14980 2115 aa13.14□□□□□ -0.31
CD9-212ENST00000610354 NYNRINQ9P2P1 1898 aaKnown RBP13.14□□□□□ -0.31
CD9-212ENST00000610354 TYW5A2RUC4 315 aaKnown RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 E9PAM4 449 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 FAM72CH0Y354 149 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 RTN2O75298 545 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 EPHX1P07099 455 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 ZNF252P-AS1Q0IIN9 211 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 MAMLD1Q13495 774 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 CAMK2GQ13555 558 aaPredicted RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 FNDC3BQ53EP0 1204 aaKnown RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 USP39Q53GS9 565 aaKnown RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 FAM72AQ5TYM5 149 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 TTC39BQ5VTQ0 682 aaPredicted RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 FAM72DQ6L9T8 149 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 FAM72BQ86X60 149 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 VSTM4Q8IW00 320 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 PGBD3Q8N328 593 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 ARFGAP1Q8N6T3 406 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 CCDC185Q8N715 623 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 ZNF557Q8N988 423 aaPredicted RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 MPP6Q9NZW5 540 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 BCCIPQ9P287 314 aaKnown RBP eCLIP13.13□□□□□ -0.31
CD9-212ENST00000610354 ARHGAP20Q9P2F6 1191 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 SLCO3A1Q9UIG8 710 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 NENFQ9UMX5 172 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 NEU3Q9UQ49 428 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 ERVW-1Q9UQF0 538 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 TBC1D30Q9Y2I9 924 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 LUC7L2Q9Y383 392 aaKnown RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 CFAP54Q96N23 3096 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 SERPING1P05155 500 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 RETP07949 1114 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 HNRNPH3P31942 346 aaKnown RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 STK19P49842 368 aaPredicted RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 ZNF143P52747 638 aaPredicted RBP13.13□□□□□ -0.31
CD9-212ENST00000610354 CDH4P55283 916 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 MTA1Q13330 715 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 SERPINA13PQ6UXR4 307 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 GAS2L3Q86XJ1 694 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 IQCDQ96DY2 449 aa13.13□□□□□ -0.31
CD9-212ENST00000610354 PSMB7Q99436 277 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms