RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 TTC17Q96AE7 1141 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 RPL10LQ96L21 214 aaKnown RBP12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 SGK2Q9HBY8 427 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
SOX2-OT-228ENST00000597828 TYW5A2RUC4 315 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 FAM149AA5PLN7 773 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 CBX4O00257 560 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 PLK4O00444 970 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 WNT9AO14904 365 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 P4HA2O15460 535 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 GADD45BO75293 160 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 LETM1O95202 739 aaPredicted RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 AFPP02771 609 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 WNT1P04628 370 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 VAV1P15498 845 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 TACR2P21452 398 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 CTSKP43235 329 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 IRAK1P51617 712 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 METAP1P53582 386 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 GALCP54803 685 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 ST8SIA6P61647 398 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 NUCB2P80303 420 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 ZBTB16Q05516 673 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 MORC3Q14149 939 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 TAF5Q15542 800 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 TEAD4Q15561 434 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 CST6Q15828 149 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 ZC3H12AQ5D1E8 599 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 C9orf64Q5T6V5 341 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 ADAT2Q7Z6V5 191 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 STK40Q8N2I9 435 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 AADATQ8N5Z0 425 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 NEUROG2Q9H2A3 272 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 SLCO3A1Q9UIG8 710 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 CNTN6Q9UQ52 1028 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 PCDHGB2Q9Y5G2 931 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 KIF26BQ2KJY2 2108 aa12.52□□□□□ -0.41
SOX2-OT-228ENST00000597828 ITPR1Q14643 2758 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 SYNJ2BP-COX16A0A087WUM0 186 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 CAPN9O14815 690 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 THAP12O43422 761 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 RNASEH2AO75792 299 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 DKK1O94907 266 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 TRUB2O95900 331 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 IGLV3-25P01717 112 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 APOEP02649 317 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 ASLP04424 464 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 GNA15P30679 374 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 GGCXP38435 758 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 CCT8P50990 548 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 CLDN6P56747 220 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 CETN1Q12798 172 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 PAK1Q13153 545 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 NNTQ13423 1086 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 COL9A2Q14055 689 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 KCNJ12Q14500 433 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 LRSAM1Q6UWE0 723 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 USP30Q70CQ3 517 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 PTPRN2Q92932 1015 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 IGSF8Q969P0 613 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 DDX50Q9BQ39 737 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 CRACR2AQ9BSW2 395 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 SRRTQ9BXP5 876 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 SLC4A5Q9BY07 1137 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 GTPBP4Q9BZE4 634 aaKnown RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 IRX2Q9BZI1 471 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 UBE2TQ9NPD8 197 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 OSGEPQ9NPF4 335 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 COX16Q9P0S2 106 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 AJAP1Q9UKB5 411 aaPredicted RBP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 NCKAP1Q9Y2A7 1128 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 CEP83Q9Y592 693 aa12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
SOX2-OT-228ENST00000597828 LRP4O75096 1905 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 A0A1W2PPC4 97 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 BICDL2A1A5D9 508 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 BECN2A8MW95 431 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 PDGFRAP16234 1089 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 MZF1P28698 734 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 SLC8A1P32418 973 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 PPP1R2P41236 205 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 MARSP56192 900 aaKnown RBP12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 PPP2CBP62714 309 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 PPP2CAP67775 309 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 CENPCQ03188 943 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 PDCLQ13371 301 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 ARHGAP44Q17R89 818 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 COL28A1Q2UY09 1125 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 TMPRSS7Q7RTY8 843 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 PASD1Q8IV76 773 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 ZNF557Q8N988 423 aaPredicted RBP12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 OR52K2Q8NGK3 314 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 ZNF606Q8WXB4 792 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 FAM129BQ96TA1 746 aa12.5□□□□□ -0.41
SOX2-OT-228ENST00000597828 CDC6Q99741 560 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms