RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 PLEKHG6Q3KR16 790 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 TTC31Q49AM3 519 aaPredicted RBP17.9■□□□□ 0.46
IRF3-208ENST00000594387 FSCBQ5H9T9 825 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 APTXQ7Z2E3 356 aaKnown RBP17.9■□□□□ 0.46
IRF3-208ENST00000594387 RGL4Q8IZJ4 473 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 DEFB119Q8N690 84 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 KDM1BQ8NB78 822 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 CEP76Q8TAP6 659 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 NT5C3BQ969T7 300 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 TBCBQ99426 244 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 PRMT1Q99873 361 aaKnown RBP17.9■□□□□ 0.46
IRF3-208ENST00000594387 NUP58Q9BVL2 599 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 MKRN2Q9H000 416 aaKnown RBP17.9■□□□□ 0.46
IRF3-208ENST00000594387 CD248Q9HCU0 757 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 ARHGEF38Q9NXL2 777 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 DLL3Q9NYJ7 618 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 TMEM59LQ9UK28 342 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 ERVW-1Q9UQF0 538 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 HS3ST4Q9Y661 456 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 USP34Q70CQ2 3546 aa17.9■□□□□ 0.46
IRF3-208ENST00000594387 TEX33O43247 280 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 ADCY5O95622 1261 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 KRT3P12035 628 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 UNGP13051 313 aaPredicted RBP17.89■□□□□ 0.45
IRF3-208ENST00000594387 PDGFRAP16234 1089 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 HOXD12P35452 270 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 FLT3P36888 993 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 CDH4P55283 916 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 CENPCQ03188 943 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 ZBTB16Q05516 673 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 PTPRNQ16849 979 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 CLEC16AQ2KHT3 1053 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 WDR45BQ5MNZ6 344 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 ZNF366Q8N895 744 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 MYEOVQ96EZ4 313 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 C1orf74Q96LT6 269 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 CFAP57Q96MR6 1250 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 SMOC1Q9H4F8 434 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 SLC25A13Q9UJS0 675 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 NCKAP1Q9Y2A7 1128 aa17.89■□□□□ 0.45
IRF3-208ENST00000594387 GON4LQ3T8J9 2241 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 A0A1W2PQC6 194 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 TARSL2A2RTX5 802 aaKnown RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 MEI4A8MW99 385 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 SLC30A4O14863 429 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 GNSP15586 552 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 PTGER3P43115 390 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 TPMTP51580 245 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 COPAP53621 1224 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 ATXN1P54253 815 aaKnown RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 ATP11AP98196 1134 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 ASIC2Q16515 512 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 CDO1Q16878 200 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 TRIM61Q5EBN2 209 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 SFMBT2Q5VUG0 894 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 ZNF776Q68DI1 518 aaPredicted RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 PHLDB2Q86SQ0 1253 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 CACUL1Q86Y37 369 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 PHF13Q86YI8 300 aaPredicted RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 GANCQ8TET4 914 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 TOE1Q96GM8 510 aaKnown RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 LMLNQ96KR4 655 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 HAPLN3Q96S86 360 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 FUCA2Q9BTY2 467 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 MUC3BQ9H195 1237 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 PRSS16Q9NQE7 514 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 USP36Q9P275 1121 aaKnown RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 SUSD2Q9UGT4 822 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 INTS6Q9UL03 887 aaKnown RBP17.88■□□□□ 0.45
IRF3-208ENST00000594387 SCML1Q9UN30 329 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 VPS13AQ96RL7 3174 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 MYO15AQ9UKN7 3530 aa17.88■□□□□ 0.45
IRF3-208ENST00000594387 ZNF292O60281 2723 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 A0A1B0GTH6 734 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 EDDM13A0A1B0GTR0 161 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 GDF9O60383 454 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 SRGAP2O75044 1071 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 CFIP05156 583 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 PLK1P53350 603 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 LIMK1P53667 647 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 ATXN3P54252 364 aaPredicted RBP17.87■□□□□ 0.45
IRF3-208ENST00000594387 KRT83P78385 493 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 IQCB1Q15051 598 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 DUOXA1Q1HG43 343 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 HNRNPA1L2Q32P51 320 aaKnown RBP17.87■□□□□ 0.45
IRF3-208ENST00000594387 ACCSLQ4AC99 568 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 CIR1Q86X95 450 aaPredicted RBP17.87■□□□□ 0.45
IRF3-208ENST00000594387 APCDD1Q8J025 514 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 EMC1Q8N766 993 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 RXFP2Q8WXD0 754 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 IGSF8Q969P0 613 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 HSPA12BQ96MM6 686 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 PCDHB18PQ96TA0 734 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 EDEM2Q9BV94 578 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 GPR174Q9BXC1 333 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 EDEM3Q9BZQ6 932 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 CBX8Q9HC52 389 aa17.87■□□□□ 0.45
IRF3-208ENST00000594387 WSB2Q9NYS7 404 aaPredicted RBP17.87■□□□□ 0.45
IRF3-208ENST00000594387 EVLQ9UI08 416 aaPredicted RBP17.87■□□□□ 0.45
IRF3-208ENST00000594387 VPS28Q9UK41 221 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms