RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SMTNL1A8MU46 457 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 CETN3O15182 167 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 DFNA5O60443 496 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 KLKB1P03952 638 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 DNTTP04053 509 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 TRIM49P0CI25 452 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 TRIM49CP0CI26 452 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 TKTL1P51854 596 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 BCAT1P54687 386 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 FAM193AP78312 1265 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 RING1Q06587 406 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 PPP3CAQ08209 521 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 ACAP1Q15027 740 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 HLA-BQ31612 363 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 EDRF1Q3B7T1 1238 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 TTC31Q49AM3 519 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-226ENST00000591534 FNDC3BQ53EP0 1204 aaKnown RBP9.83□□□□□ -0.84
BRCA1-226ENST00000591534 C1orf220Q5T0J3 134 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 CCNI2Q6ZMN8 369 aaPredicted RBP9.83□□□□□ -0.84
BRCA1-226ENST00000591534 PIGZQ86VD9 579 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 AHI1Q8N157 1196 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 SIX6OS1Q8N1H7 587 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 GALNT15Q8N3T1 639 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 SNX19Q92543 992 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 TMA16Q96EY4 203 aaKnown RBP9.83□□□□□ -0.84
BRCA1-226ENST00000591534 CAMK1GQ96NX5 476 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 DDX50Q9BQ39 737 aaKnown RBP9.83□□□□□ -0.84
BRCA1-226ENST00000591534 LHX5Q9H2C1 402 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 OSGEPQ9NPF4 335 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 RAB20Q9NX57 234 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 SUN2Q9UH99 717 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 PCOLCE2Q9UKZ9 415 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 NCKAP1Q9Y2A7 1128 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 MYO16Q9Y6X6 1858 aa9.83□□□□□ -0.84
BRCA1-226ENST00000591534 BECN2A8MW95 431 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 GOLGA6L19H0YKK7 550 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 XPO1O14980 1071 aaKnown RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 IRAK2O43187 625 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 RNASEH1O60930 286 aaKnown RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 FGFR1OPO95684 399 aaKnown RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 TPM3P06753 285 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 BRD2P25440 801 aaKnown RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 SLC11A2P49281 568 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 ST8SIA6P61647 398 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 SCAPQ12770 1279 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 COL9A2Q14055 689 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 TRIP4Q15650 581 aaPredicted RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 C11orf91Q3C1V1 193 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 SGO2Q562F6 1265 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 RAB41Q5JT25 222 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 MPP7Q5T2T1 576 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 ADGRF1Q5T601 910 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 PM20D1Q6GTS8 502 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 TRIM46Q7Z4K8 759 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 ADAT2Q7Z6V5 191 aaKnown RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 UNC45BQ8IWX7 931 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 FAM217AQ8IXS0 508 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 SLC4A11Q8NBS3 891 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 ANKRD20A12PQ8NF67 263 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 TSG101Q99816 390 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 BTBD1Q9H0C5 482 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 ABCC13Q9NSE7 274 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 TMEM63CQ9P1W3 806 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 EIF2B4Q9UI10 523 aaKnown RBP9.82□□□□□ -0.84
BRCA1-226ENST00000591534 SCML1Q9UN30 329 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 PLXND1Q9Y4D7 1925 aa9.82□□□□□ -0.84
BRCA1-226ENST00000591534 SPEGQ15772 3267 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 SYCE3A1L190 88 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 KCNJ18B7U540 433 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 FZD6O60353 706 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 CBFA2T3O75081 653 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 AVPP01185 164 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 DLDP09622 509 aaKnown RBP9.81□□□□□ -0.84
BRCA1-226ENST00000591534 SETSIPP0DME0 302 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 CDK4P11802 303 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 POLR2EP19388 210 aaKnown RBP9.81□□□□□ -0.84
BRCA1-226ENST00000591534 TBXAS1P24557 533 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-226ENST00000591534 PRKCHP24723 683 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 GRK6P43250 576 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 GRIA4P48058 902 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 COPAP53621 1224 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 RAD23BP54727 409 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 BST2Q10589 180 aaKnown RBP9.81□□□□□ -0.84
BRCA1-226ENST00000591534 CETN1Q12798 172 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 CAMK2GQ13555 558 aaPredicted RBP9.81□□□□□ -0.84
BRCA1-226ENST00000591534 GOLGA7BQ2TAP0 167 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 TCERG1LQ5VWI1 586 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 NUGGCQ68CJ6 796 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 FAM124AQ86V42 546 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 FMNL3Q8IVF7 1028 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 PNPLA1Q8N8W4 532 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 IFT43Q96FT9 208 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 EEF2KMTQ96G04 330 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 BPIFA3Q9BQP9 254 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 ULBP1Q9BZM6 244 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 SGK2Q9HBY8 427 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 CNGB3Q9NQW8 809 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 GGA2Q9UJY4 613 aa9.81□□□□□ -0.84
BRCA1-226ENST00000591534 STOML2Q9UJZ1 356 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms