RNA–Protein interactions for RNA: ENST00000590422.1

CTIF-208, Transcript of cap binding complex dependent translation initiation factor, humanhuman

TSL 3

Gene CTIF, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTIF-208ENST00000590422 TEAD4Q15561 434 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 CST6Q15828 149 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 ZC3H12AQ5D1E8 599 aaKnown RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 RAP1GAP2Q684P5 730 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 NCEH1Q6PIU2 408 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 USP30Q70CQ3 517 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 CIR1Q86X95 450 aaPredicted RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 MMAAQ8IVH4 418 aaKnown RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 APCDD1Q8J025 514 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 LGI2Q8N0V4 545 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 GANCQ8TET4 914 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 GTPBP4Q9BZE4 634 aaKnown RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 NEUROG2Q9H2A3 272 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 FBXL12Q9NXK8 326 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 KIAA1522Q9P206 1035 aaPredicted RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 SUN2Q9UH99 717 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 SLCO3A1Q9UIG8 710 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 ERVW-1Q9UQF0 538 aa12.53□□□□□ -0.4
CTIF-208ENST00000590422 COL5A1P20908 1838 aaPredicted RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 URB1O60287 2271 aaKnown RBP12.53□□□□□ -0.4
CTIF-208ENST00000590422 ARID1BQ8NFD5 2236 aaPredicted RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 TYW5A2RUC4 315 aaKnown RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 FAM149AA5PLN7 773 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 WNT9AO14904 365 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 PCDHGA12O60330 932 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 ASLP04424 464 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 KRT5P13647 590 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 VAV1P15498 845 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 PSMD8P48556 350 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 METAP1P53582 386 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 GALCP54803 685 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 ST8SIA6P61647 398 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 APBA1Q02410 837 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 MORC3Q14149 939 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 ARID5BQ14865 1188 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 TAF5Q15542 800 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 PRAMEF14Q5SWL7 426 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 GJB7Q6PEY0 223 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 C19orf48Q6RUI8 117 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 TMPRSS7Q7RTY8 843 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 CHSY1Q86X52 802 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 AADATQ8N5Z0 425 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 ZNF557Q8N988 423 aaPredicted RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 RPL10LQ96L21 214 aaKnown RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 FAM129BQ96TA1 746 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 CDC6Q99741 560 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 DDX50Q9BQ39 737 aaKnown RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 SLC4A5Q9BY07 1137 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 CCDC86Q9H6F5 360 aaKnown RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 HOOK1Q9UJC3 728 aaKnown RBP12.52□□□□□ -0.41
CTIF-208ENST00000590422 ITIH6Q6UXX5 1313 aa12.52□□□□□ -0.41
CTIF-208ENST00000590422 A0A1W2PPC4 97 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 BECN2A8MW95 431 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 CBX4O00257 560 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 VILLO15195 856 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 SART1O43290 800 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 RNASEH2AO75792 299 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 LETM1O95202 739 aaPredicted RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 TRUB2O95900 331 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 APOEP02649 317 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 AFPP02771 609 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 TACR2P21452 398 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 GRK6P43250 576 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 IRAK1P51617 712 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 ADPRHP54922 357 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 MARSP56192 900 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 PPP2CBP62714 309 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 RACK1P63244 317 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 PPP2CAP67775 309 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 CETN1Q12798 172 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 PAK1Q13153 545 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 EIF4EBP2Q13542 120 aaPredicted RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 SHBQ15464 509 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 CCDC157Q569K6 752 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 BEND5Q7L4P6 421 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 ADAT2Q7Z6V5 191 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 GATAD2AQ86YP4 633 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 STK40Q8N2I9 435 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 PRMT1Q99873 361 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 SCML1Q9UN30 329 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 NCKAP1Q9Y2A7 1128 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 RAXQ9Y2V3 346 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 CEP83Q9Y592 693 aa12.51□□□□□ -0.41
CTIF-208ENST00000590422 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.51□□□□□ -0.41
CTIF-208ENST00000590422 SMG1Q96Q15 3661 aaKnown RBP12.51□□□□□ -0.41
CTIF-208ENST00000590422 A0A1B0GTQ1 180 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 EDDM13A0A1B0GTR0 161 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 BICDL2A1A5D9 508 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 PLK4O00444 970 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 CAPN9O14815 690 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 THAP12O43422 761 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 TNFSF14O43557 240 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 SRPRAP08240 638 aaKnown RBP12.5□□□□□ -0.41
CTIF-208ENST00000590422 PDGFRAP16234 1089 aa12.5□□□□□ -0.41
CTIF-208ENST00000590422 MZF1P28698 734 aaPredicted RBP12.5□□□□□ -0.41
CTIF-208ENST00000590422 GNA15P30679 374 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms