RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 SDC4P31431 198 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 RDXP35241 583 aaKnown RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 CTSOP43234 321 aaPredicted RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 ATXN1P54253 815 aaKnown RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 OXCT1P55809 520 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 FANCCQ00597 558 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 NR1I3Q14994 352 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 PLEKHG6Q3KR16 790 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 PLA2G2CQ5R387 149 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 TTC39BQ5VTQ0 682 aaPredicted RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 OTUD1Q5VV17 481 aaPredicted RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 LYSMD4Q5XG99 296 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 TRNP1Q6NT89 227 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 IRF2BP2Q7Z5L9 587 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 METTL3Q86U44 580 aaKnown RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 PHF13Q86YI8 300 aaPredicted RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 OR2T3Q8NH03 318 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 PGAP3Q96FM1 320 aaPredicted RBP12.46□□□□□ -0.41
TPM4-212ENST00000590180 SELENOOQ9BVL4 669 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 ADAM33Q9BZ11 813 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 TMEM245Q9H330 911 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 MTG2Q9H4K7 406 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 CD93Q9NPY3 652 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 PRSS16Q9NQE7 514 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 ANLNQ9NQW6 1124 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 SLCO3A1Q9UIG8 710 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 CFAP54Q96N23 3096 aa12.46□□□□□ -0.41
TPM4-212ENST00000590180 SPTBN2O15020 2390 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 A0A1B0GVM2 712 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 A0A1W2PQC6 194 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 TCAF2A6NFQ2 919 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 LRRC53A6NM62 1247 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 SRGAP2O75044 1071 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 CLDN11O75508 207 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 SRPRAP08240 638 aaKnown RBP12.45□□□□□ -0.42
TPM4-212ENST00000590180 MZF1P28698 734 aaPredicted RBP12.45□□□□□ -0.42
TPM4-212ENST00000590180 CD6P30203 668 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 OXTRP30559 389 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 NNMTP40261 264 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 COPAP53621 1224 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 UBASH3AP57075 661 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 ECT2LQ008S8 904 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 CENPCQ03188 943 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 ZNF33AQ06730 810 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 CAMK2GQ13555 558 aaPredicted RBP12.45□□□□□ -0.42
TPM4-212ENST00000590180 SLC12A1Q13621 1099 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 ASIC2Q16515 512 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 CDO1Q16878 200 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 C15orf59Q2T9L4 293 aaPredicted RBP12.45□□□□□ -0.42
TPM4-212ENST00000590180 ZSCAN23Q3MJ62 389 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 CCDC14Q49A88 953 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 SPDYCQ5MJ68 293 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 SFMBT2Q5VUG0 894 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 TCEAL6Q6IPX3 200 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 ACAD10Q6JQN1 1059 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 ARCQ7LC44 396 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 DGLUCYQ7Z3D6 616 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 FAM124AQ86V42 546 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 FAM131BQ86XD5 332 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 RGL4Q8IZJ4 473 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 JOSD2Q8TAC2 188 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 NETO1Q8TDF5 533 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 GANCQ8TET4 914 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 BAP1Q92560 729 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 TCEAL3Q969E4 200 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 TOE1Q96GM8 510 aaKnown RBP12.45□□□□□ -0.42
TPM4-212ENST00000590180 RPL10LQ96L21 214 aaKnown RBP12.45□□□□□ -0.42
TPM4-212ENST00000590180 TMPRSS4Q9NRS4 437 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 MYO6Q9UM54 1294 aa12.45□□□□□ -0.42
TPM4-212ENST00000590180 DCDC2BA2VCK2 349 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 TMCO5BA8MYB1 307 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 TTC34A8MYJ7 566 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 PATE3B3GLJ2 98 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 RNASEH1O60930 286 aaKnown RBP12.44□□□□□ -0.42
TPM4-212ENST00000590180 CNTN5O94779 1100 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 DNTTP04053 509 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 ITPKAP23677 461 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 RFC1P35251 1148 aaPredicted RBP12.44□□□□□ -0.42
TPM4-212ENST00000590180 TPMTP51580 245 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 IRAK1P51617 712 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 PLK1P53350 603 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 CDH4P55283 916 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 IRX4P78413 519 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 SULT2A1Q06520 285 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 PTP4A2Q12974 167 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 ARL13BQ3SXY8 428 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 SH3PXD2AQ5TCZ1 1133 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 WDR59Q6PJI9 974 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 LRSAM1Q6UWE0 723 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 SYT12Q8IV01 421 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 CPLX3Q8WVH0 158 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 MRGPRX3Q96LB0 322 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 C1orf74Q96LT6 269 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 HAPLN3Q96S86 360 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 NUP58Q9BVL2 599 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 GPR174Q9BXC1 333 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 EDEM3Q9BZQ6 932 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 MUC3BQ9H195 1237 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 RXFP3Q9NSD7 469 aa12.44□□□□□ -0.42
TPM4-212ENST00000590180 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms