RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 FAM172AQ8WUF8 416 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 CPLX3Q8WVH0 158 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 LOXL4Q96JB6 756 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 ZC3H10Q96K80 434 aaKnown RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 LMLNQ96KR4 655 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 MRGPRX1Q96LB2 322 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 XPO4Q9C0E2 1151 aaKnown RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 PRDM16Q9HAZ2 1276 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 TMPRSS4Q9NRS4 437 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 TAS2R14Q9NYV8 317 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 INTS6Q9UL03 887 aaKnown RBP15.28■□□□□ 0.04
ATG4D-207ENST00000587256 CYP8B1Q9UNU6 501 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 SNX10Q9Y5X0 201 aa15.28■□□□□ 0.04
ATG4D-207ENST00000587256 I6L893 689 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 ATMINO43313 823 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 ZNF217O75362 1048 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 CLDN11O75508 207 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 SKILP12757 684 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 RRM1P23921 792 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 RFC1P35251 1148 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 DHPSP49366 369 aaPredicted RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 SLC12A1Q13621 1099 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 MAP7D1Q3KQU3 841 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 CXorf57Q6NSI4 855 aaKnown RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 LPCAT2Q7L5N7 544 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 STRADAQ7RTN6 431 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 BNIPLQ7Z465 357 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 TTC17Q96AE7 1141 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 MKRN2Q9H000 416 aaKnown RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 ARRDC1-AS1Q9H2J1 176 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 TMEM245Q9H330 911 aa15.27■□□□□ 0.04
ATG4D-207ENST00000587256 LUC7L2Q9Y383 392 aaKnown RBP15.27■□□□□ 0.04
ATG4D-207ENST00000587256 CKAP5Q14008 2032 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ITIH6Q6UXX5 1313 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 SIGLEC16A6NMB1 481 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 E9PAM4 449 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 LRP3O75074 770 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ENDOD1O94919 500 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ACADMP11310 421 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 MZF1P28698 734 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-207ENST00000587256 MPLP40238 635 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 CTSOP43234 321 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-207ENST00000587256 CDH4P55283 916 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ZBED6P86452 979 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 CREB5Q02930 508 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 RAB6CQ53S08 254 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 SH3PXD2AQ5TCZ1 1133 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 WDR59Q6PJI9 974 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ARMCX6Q7L4S7 300 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 VPS36Q86VN1 386 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 TMPRSS6Q8IU80 811 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 APCDD1Q8J025 514 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 FRMD1Q8N878 549 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 OR2T3Q8NH03 318 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 PRCCQ92733 491 aaPredicted RBP15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ZNF653Q96CK0 615 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 SIPA1Q96FS4 1042 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 HAPLN3Q96S86 360 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 RAB6CQ9H0N0 254 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 MUC3BQ9H195 1237 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 PARD6AQ9NPB6 346 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 SEMA4GQ9NTN9 838 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 VPS28Q9UK41 221 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 CAPN11Q9UMQ6 739 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 ERVW-1Q9UQF0 538 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 PCDHGA5Q9Y5G8 931 aa15.26■□□□□ 0.03
ATG4D-207ENST00000587256 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.26■□□□□ 0.03
ATG4D-207ENST00000587256 FRYLO94915 3013 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 TCRBV5S1A1TA0A578 114 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 DDX3XO00571 662 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 CCP110O43303 1012 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 SRGAP2O75044 1071 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 CNTN5O94779 1100 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 GYPCP04921 128 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 RHOCP08134 193 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 COPAP53621 1224 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 HDAC4P56524 1084 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 RPL7AP62424 266 aaKnown RBP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 ECT2LQ008S8 904 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 RPL6Q02878 288 aaKnown RBP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 LMNB2Q03252 620 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 SULT2A1Q06520 285 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 CAMK2GQ13555 558 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 CCDC6Q16204 474 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 C5orf22Q49AR2 442 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 ALFQ53S48 1182 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 SLC36A4Q6YBV0 504 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 CYP2U1Q7Z449 544 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 TFAP2DQ7Z6R9 452 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 TMEFF1Q8IYR6 380 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 SYN2Q92777 582 aaPredicted RBP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 TRIM11Q96F44 468 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 VCPIP1Q96JH7 1222 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 C1orf74Q96LT6 269 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 PPP1R9BQ96SB3 815 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.25■□□□□ 0.03
ATG4D-207ENST00000587256 FBRSQ9HAH7 460 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 CD93Q9NPY3 652 aa15.25■□□□□ 0.03
ATG4D-207ENST00000587256 PARVAQ9NVD7 372 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms