RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 FBRSQ9HAH7 460 aa11.24□□□□□ -0.61
NDEL1-208ENST00000580237 ARHGEF38Q9NXL2 777 aa11.24□□□□□ -0.61
NDEL1-208ENST00000580237 SLC25A13Q9UJS0 675 aa11.24□□□□□ -0.61
NDEL1-208ENST00000580237 TMEM59LQ9UK28 342 aa11.24□□□□□ -0.61
NDEL1-208ENST00000580237 VPS28Q9UK41 221 aa11.24□□□□□ -0.61
NDEL1-208ENST00000580237 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.24□□□□□ -0.61
NDEL1-208ENST00000580237 MYO15AQ9UKN7 3530 aa11.24□□□□□ -0.61
NDEL1-208ENST00000580237 ADAMTS9Q9P2N4 1935 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 TP53BP1Q12888 1972 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 USP34Q70CQ2 3546 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 IGHV1OR15-9A0A0B4J2B8 117 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 MEI4A8MW99 385 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 PRR5-ARHGAP8B1AHC4 643 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 CLDN11O75508 207 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 GJB6O95452 261 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ADCY5O95622 1261 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 RHOCP08134 193 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 GPD1P21695 349 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ID4P47928 161 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ATXN1P54253 815 aaKnown RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ARHGAP8P85298 464 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 SULT2A1Q06520 285 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 C1QBPQ07021 282 aaKnown RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 SLC12A1Q13621 1099 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 PTPRNQ16849 979 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 C15orf59Q2T9L4 293 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 MAP7D1Q3KQU3 841 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 TTC31Q49AM3 519 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 FSCBQ5H9T9 825 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ACBD5Q5T8D3 534 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 TRNP1Q6NT89 227 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 DCUN1D2Q6PH85 259 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 MON1BQ7L1V2 547 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ARCQ7LC44 396 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 KIAA0907Q7Z7F0 614 aaPredicted RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 FRMD1Q8N878 549 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 JOSD2Q8TAC2 188 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 PIGKQ92643 395 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 IGSF8Q969P0 613 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 NT5C3BQ969T7 300 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 MCEEQ96PE7 176 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 NUP58Q9BVL2 599 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 MKRN2Q9H000 416 aaKnown RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 TMEM245Q9H330 911 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 TSPY26PQ9H489 355 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 VPS45Q9NRW7 570 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 IFNKQ9P0W0 207 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 SNX10Q9Y5X0 201 aa11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ATXN2Q99700 1313 aaKnown RBP11.23□□□□□ -0.61
NDEL1-208ENST00000580237 ZNF292O60281 2723 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 BCLAF3A2AJT9 711 aaKnown RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 C2CD4BA6NLJ0 364 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 E9PAM4 449 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 RNASEH1O60930 286 aaKnown RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 SRGAP2O75044 1071 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 DNTTP04053 509 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 SRPRAP08240 638 aaKnown RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 SDHBP21912 280 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 CD6P30203 668 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 DPP6P42658 865 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 PTPN9P43378 593 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 IRAK1P51617 712 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 CDH4P55283 916 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 GSCP56915 257 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 ECT2LQ008S8 904 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 CAMK2GQ13555 558 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 NR1I3Q14994 352 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 SF3A2Q15428 464 aaKnown RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 RSPO4Q2I0M5 234 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 ZNF776Q68DI1 518 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 ACAD10Q6JQN1 1059 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 TFAP2DQ7Z6R9 452 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 FAM124AQ86V42 546 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 VPS36Q86VN1 386 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 APCDD1Q8J025 514 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 DEFB119Q8N690 84 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 GANCQ8TET4 914 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 FAM172AQ8WUF8 416 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 TTC17Q96AE7 1141 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 IQCDQ96DY2 449 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 HSPA12BQ96MM6 686 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 ADAM33Q9BZ11 813 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 EDEM3Q9BZQ6 932 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 SMOC1Q9H4F8 434 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 HAUS4Q9H6D7 363 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 CD248Q9HCU0 757 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 CD93Q9NPY3 652 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 TMPRSS4Q9NRS4 437 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 SUN2Q9UH99 717 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 MBD1Q9UIS9 605 aaPredicted RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 INTS6Q9UL03 887 aaKnown RBP11.22□□□□□ -0.61
NDEL1-208ENST00000580237 ERVW-1Q9UQF0 538 aa11.22□□□□□ -0.61
NDEL1-208ENST00000580237 EDDM13A0A1B0GTR0 161 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 ATMINO43313 823 aaPredicted RBP11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CBFA2T2O43439 604 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 CFIP05156 583 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 ZNF806P0C7X5 589 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 RRM1P23921 792 aa11.21□□□□□ -0.61
NDEL1-208ENST00000580237 MZF1P28698 734 aaPredicted RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms