RNA–Protein interactions for RNA: ENST00000571688.5

LITAF-209, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-209ENST00000571688 HERC3Q15034 1050 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 SLC9A4Q6AI14 798 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 HNRNPABQ99729 332 aaKnown RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 CORO1BQ9BR76 489 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 ANKRD60Q9BZ19 345 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 WDR55Q9H6Y2 383 aaPredicted RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 ITGB1BP2Q9UKP3 347 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 H0YIN7 160 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 E2F6O75461 281 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 GCATO75600 419 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 DGKIO75912 1065 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 CD19P15391 556 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 ZNF12P17014 697 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 HALP42357 657 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 CDH15P55291 814 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 STILQ15468 1287 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 LSM12Q3MHD2 195 aaKnown RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 ZBED5Q49AG3 693 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 DCDC5Q6ZRR9 648 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 HIPK3Q9H422 1215 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 DBNDD1Q9H9R9 158 aa17.2■□□□□ 0.34
LITAF-209ENST00000571688 TUBA8Q9NY65 449 aaPredicted RBP17.2■□□□□ 0.34
LITAF-209ENST00000571688 MED7O43513 233 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 AMHP03971 560 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 TYK2P29597 1187 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 ADSLP30566 484 aaPredicted RBP17.19■□□□□ 0.34
LITAF-209ENST00000571688 HOXD12P35452 270 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 CAP2P40123 477 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 ZNF829Q3KNS6 432 aaPredicted RBP17.19■□□□□ 0.34
LITAF-209ENST00000571688 MAMDC4Q6UXC1 1216 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 SEMA6AQ9H2E6 1030 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 FER1L6Q2WGJ9 1857 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 TESPA1A2RU30 521 aaPredicted RBP17.19■□□□□ 0.34
LITAF-209ENST00000571688 TMEM247A6NEH6 219 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 G3V2L1 256 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 K7ERI5 159 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 PSMD12O00232 456 aaPredicted RBP17.19■□□□□ 0.34
LITAF-209ENST00000571688 TADA2AO75478 443 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 TRPC3Q13507 836 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 SEMA5AQ13591 1074 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 PDK2Q15119 407 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 PODNQ7Z5L7 613 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 CDKL3Q8IVW4 592 aaPredicted RBP17.19■□□□□ 0.34
LITAF-209ENST00000571688 SLC15A3Q8IY34 581 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 TNS4Q8IZW8 715 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 MYO1HQ8N1T3 1032 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 PCDH19Q8TAB3 1148 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 SGF29Q96ES7 293 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 CNPY3Q9BT09 278 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 DCUN1D5Q9BTE7 237 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 SELENONQ9NZV5 590 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 AP4S1Q9Y587 144 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 CROCCQ5TZA2 2017 aa17.19■□□□□ 0.34
LITAF-209ENST00000571688 PLOD2O00469 737 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 TRIM38O00635 465 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 VAPBO95292 243 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 MAGEA12P43365 314 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 BCAP31P51572 246 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 FKBP1AP62942 108 aaKnown RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 PRKCEQ02156 737 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 KCTD21Q4G0X4 260 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 CCDC92Q53HC0 331 aaPredicted RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 TRNP1Q6NT89 227 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 SWSAP1Q6NVH7 229 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 DCLRE1AQ6PJP8 1040 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 AGR3Q8TD06 166 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 ADAMTS16Q8TE57 1224 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 LRTOMTQ8WZ04 291 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 ASB9Q96DX5 294 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 PDCD2LQ9BRP1 358 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 ADPGKQ9BRR6 497 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 PAIP1Q9H074 479 aaKnown RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 DOLKQ9UPQ8 538 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 NEMP1O14524 444 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 PRPSAP2O60256 369 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 ADAM23O75077 832 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 GPD1P21695 349 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 TNFSF9P41273 254 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 ESRRGP62508 458 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 GRM1Q13255 1194 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 ART3Q13508 389 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 EMC2Q15006 297 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 FAM98CQ17RN3 349 aaKnown RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 FAM102AQ5T9C2 384 aaPredicted RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 FASTKD5Q7L8L6 764 aaKnown RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 PLD6Q8N2A8 252 aaKnown RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 ISL2Q96A47 359 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 PLEKHA8Q96JA3 519 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 SLC29A1Q99808 456 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 BRD8Q9H0E9 1235 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 VPS33BQ9H267 617 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 EFCAB1Q9HAE3 211 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 SNX15Q9NRS6 342 aa17.18■□□□□ 0.34
LITAF-209ENST00000571688 IPO11Q9UI26 975 aaKnown RBP17.18■□□□□ 0.34
LITAF-209ENST00000571688 A0A087WXM4 84 aa17.17■□□□□ 0.34
LITAF-209ENST00000571688 HTR3EA5X5Y0 456 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms