RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 PARD3BQ8TEW8 1205 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 NDRG1Q92597 394 aaKnown RBP10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 KLHDC7BQ96G42 594 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 ARHGAP9Q9BRR9 750 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 SFMBT1Q9UHJ3 866 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 CYTH4Q9UIA0 394 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 DMTF1Q9Y222 760 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 CLIC4Q9Y696 253 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 NOTCH2Q04721 2471 aa10.84□□□□□ -0.67
CTDNEP1-202ENST00000570380 ZFC3H1O60293 1989 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 CLEC18AA5D8T8 446 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 TBL1XO60907 577 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 PIAS2O75928 621 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 CENPBP07199 599 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLFN14P0C7P3 912 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 FAM87AP0C7U9 286 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 GJB2P29033 226 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 TXLNAP40222 546 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 CTSOP43234 321 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 METAP1P53582 386 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 SNRPFP62306 86 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 POM121L1PQ3SYA9 428 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 RAB41Q5JT25 222 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 PIK3R6Q5UE93 754 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 RFWD3Q6PCD5 774 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 FOXR1Q6PIV2 292 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 CLEC18BQ6UXF7 455 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 CCDC73Q6ZRK6 1079 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 USP53Q70EK8 1073 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 BHLHA9Q7RTU4 235 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 KDM1BQ8NB78 822 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 CLEC18CQ8NCF0 446 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 IFI44Q8TCB0 444 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 PTPRN2Q92932 1015 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 FAM131CQ96AQ9 280 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 SEMA3CQ99985 751 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 NT5C1AQ9BXI3 368 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 KLHL11Q9NVR0 708 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 SEPT3Q9UH03 358 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLCO3A1Q9UIG8 710 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 ATXN7L1Q9ULK2 861 aaPredicted RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 ERVW-1Q9UQF0 538 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 HBS1LQ9Y450 684 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 SRPRBQ9Y5M8 271 aaKnown RBP10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 ITIH6Q6UXX5 1313 aa10.83□□□□□ -0.68
CTDNEP1-202ENST00000570380 ICE1Q9Y2F5 2266 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 EDDM13A0A1B0GTR0 161 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 GOLGA6L7A0A1B0GV03 622 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 PRAMEF26H0Y7S4 382 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 EXOC3O60645 756 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 RTN2O75298 545 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 TNFSF15O95150 251 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 LATS1O95835 1130 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 ADH1BP00325 375 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 ASS1P00966 412 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 IL1BP01584 269 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 ASLP04424 464 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 RPN1P04843 607 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 ITGB2P05107 769 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 THEGLP0DJG4 465 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 TRIM21P19474 475 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 MZF1P28698 734 aaPredicted RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 SLC6A4P31645 630 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 NUDT1P36639 197 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 DUSP3P51452 185 aaPredicted RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 DLG4P78352 724 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 KCNMA1Q12791 1236 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 SRSF6Q13247 344 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 SERINC3Q13530 473 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 ZACNQ401N2 412 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 C4orf17Q53FE4 359 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 MPP7Q5T2T1 576 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 MMS22LQ6ZRQ5 1243 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 BRAPQ7Z569 592 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 PIGZQ86VD9 579 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 TRIM69Q86WT6 500 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 MFN1Q8IWA4 741 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 C12orf56Q8IXR9 622 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 ARL14Q8N4G2 192 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 FIBINQ8TAL6 211 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 TAF4BQ92750 862 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 GRAMD1AQ96CP6 724 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 SGF29Q96ES7 293 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 KDM4CQ9H3R0 1056 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 USP29Q9HBJ7 922 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 WDR70Q9NW82 654 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 NLGN3Q9NZ94 848 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 STIM2Q9P246 746 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 CREBBPQ92793 2442 aa10.82□□□□□ -0.68
CTDNEP1-202ENST00000570380 K7ESM1 405 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 CASC3O15234 703 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 MSI1O43347 362 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 PLRG1O43660 514 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 NOBOXO60393 691 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 NEBLO76041 1014 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 GJB6O95452 261 aa10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 SRPRAP08240 638 aaKnown RBP10.81□□□□□ -0.68
CTDNEP1-202ENST00000570380 ALPPL2P10696 532 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms