RNA–Protein interactions for RNA: ENST00000566219.1

EDC3-210, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-210ENST00000566219 SKA1Q96BD8 255 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 TMEM176AQ96HP8 235 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 BPIFA3Q9BQP9 254 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 CYP3A43Q9HB55 503 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 GDF3Q9NR23 364 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 FBXL12Q9NXK8 326 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 COQ4Q9Y3A0 265 aa16.38■□□□□ 0.21
EDC3-210ENST00000566219 A0A1W2PP55 124 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 WNT9AO14904 365 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 YKT6O15498 198 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 CD70P32970 193 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 GALCP54803 685 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 ANO6Q4KMQ2 910 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 TAF1BQ53T94 588 aaPredicted RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 USP30Q70CQ3 517 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 KIAA0907Q7Z7F0 614 aaPredicted RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 PIGZQ86VD9 579 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 ERICH1Q86X53 443 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 FAM114A1Q8IWE2 563 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 TSC1Q92574 1164 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 NDRG1Q92597 394 aaKnown RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 TMA16Q96EY4 203 aaKnown RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 ULBP1Q9BZM6 244 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 NAT10Q9H0A0 1025 aaKnown RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 RSPH9Q9H1X1 276 aaPredicted RBP16.37■□□□□ 0.21
EDC3-210ENST00000566219 MMRN2Q9H8L6 949 aa16.37■□□□□ 0.21
EDC3-210ENST00000566219 MYO18BQ8IUG5 2567 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 MID1O15344 667 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 MSI1O43347 362 aaKnown RBP16.36■□□□□ 0.21
EDC3-210ENST00000566219 POLR2EP19388 210 aaKnown RBP16.36■□□□□ 0.21
EDC3-210ENST00000566219 GLDCP23378 1020 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 CD38P28907 300 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 ACTN2P35609 894 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 FMO5P49326 533 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 TKTL1P51854 596 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 ZNF445P59923 1031 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 MYL5Q02045 173 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 KCNJ12Q14500 433 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 TBC1D25Q3MII6 688 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 DHX40Q8IX18 779 aaKnown RBP16.36■□□□□ 0.21
EDC3-210ENST00000566219 FBXL13Q8NEE6 735 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 HEXIM2Q96MH2 286 aaKnown RBP16.36■□□□□ 0.21
EDC3-210ENST00000566219 LGMNQ99538 433 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 SAMSN1Q9NSI8 373 aaKnown RBP16.36■□□□□ 0.21
EDC3-210ENST00000566219 SUN2Q9UH99 717 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 SFMBT1Q9UHJ3 866 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.36■□□□□ 0.21
EDC3-210ENST00000566219 COL6A6A6NMZ7 2263 aa16.36■□□□□ 0.21
EDC3-210ENST00000566219 NAV2Q8IVL1 2488 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 A0A1W2PR77 199 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 LRRC72A6NJI9 287 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 ERVH48-1M5A8F1 160 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 P4HA2O15460 535 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 SIN3BO75182 1162 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 RNASEH2AO75792 299 aaKnown RBP16.35■□□□□ 0.21
EDC3-210ENST00000566219 ZBED1O96006 694 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 ARRB1P49407 418 aaPredicted RBP16.35■□□□□ 0.21
EDC3-210ENST00000566219 KCNH2Q12809 1159 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 BNIP3Q12983 259 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 NCAPHQ15003 741 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 CST6Q15828 149 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 RAB41Q5JT25 222 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 CDKAL1Q5VV42 579 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 RFWD3Q6PCD5 774 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 BHLHA9Q7RTU4 235 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 EDEM1Q92611 657 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 SEMA4DQ92854 862 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 MYO19Q96H55 970 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 NAF1Q96HR8 494 aaKnown RBP16.35■□□□□ 0.21
EDC3-210ENST00000566219 DNAI2Q9GZS0 605 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 NEUROG2Q9H2A3 272 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 OLA1Q9NTK5 396 aaKnown RBP16.35■□□□□ 0.21
EDC3-210ENST00000566219 RAB20Q9NX57 234 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 SCML1Q9UN30 329 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 CLCA2Q9UQC9 943 aa16.35■□□□□ 0.21
EDC3-210ENST00000566219 HBS1LQ9Y450 684 aaKnown RBP16.35■□□□□ 0.21
EDC3-210ENST00000566219 ARID1BQ8NFD5 2236 aaPredicted RBP16.35■□□□□ 0.21
EDC3-210ENST00000566219 PYCARD-AS1I3L0S3 204 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 TBL1XO60907 577 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 RNASEH1O60930 286 aaKnown RBP16.34■□□□□ 0.21
EDC3-210ENST00000566219 AFPP02771 609 aaKnown RBP16.34■□□□□ 0.21
EDC3-210ENST00000566219 EEF1GP26641 437 aaKnown RBP16.34■□□□□ 0.21
EDC3-210ENST00000566219 PSMD8P48556 350 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 NXPH1P58417 271 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 ST8SIA6P61647 398 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 ADGRF1Q5T601 910 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 SFMBT2Q5VUG0 894 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 KDM7AQ6ZMT4 941 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 MMAAQ8IVH4 418 aaKnown RBP16.34■□□□□ 0.21
EDC3-210ENST00000566219 OR2T34Q8NGX1 318 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 RNF139Q8WU17 664 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 FAXDC2Q96IV6 333 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 SERAC1Q96JX3 654 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 OMDQ99983 421 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 FANCLQ9NW38 375 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 STOML2Q9UJZ1 356 aa16.34■□□□□ 0.21
EDC3-210ENST00000566219 TULP2O00295 520 aa16.33■□□□□ 0.2
EDC3-210ENST00000566219 CKMT2P17540 419 aa16.33■□□□□ 0.2
EDC3-210ENST00000566219 MTIF2P46199 727 aaKnown RBP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms