RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 RAB44Q7Z6P3 723 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 CHSY1Q86X52 802 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 CFAP52Q8N1V2 620 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 C1orf131Q8NDD1 294 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 ZNF397Q8NF99 534 aaPredicted RBP12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 RNF34Q969K3 372 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 SKA1Q96BD8 255 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 CDC6Q99741 560 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 PRMT1Q99873 361 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 TM7SF3Q9NS93 570 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 FBXL12Q9NXK8 326 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 CHMP5Q9NZZ3 219 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 ADAMTS1Q9UHI8 967 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 FZD4Q9ULV1 537 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 APOBEC2Q9Y235 224 aaKnown RBP12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 CABIN1Q9Y6J0 2220 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 ITIH6Q6UXX5 1313 aa12.59□□□□□ -0.39
GTF3C1-204ENST00000564664 LRRC72A6NJI9 287 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 FLRT2O43155 660 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 CBFA2T3O75081 653 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 SIN3BO75182 1162 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 ADH1BP00325 375 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 F9P00740 461 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 C5AR1P21730 350 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 NOS2P35228 1153 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 CSNK1EP49674 416 aaKnown RBP12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC6A3Q01959 620 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 RAP1GAP2Q684P5 730 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 KIAA0895LQ68EN5 471 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 GJB7Q6PEY0 223 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 LRSAM1Q6UWE0 723 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 DEFB106AQ8N104 65 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 ZNF366Q8N895 744 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 OR2I1PQ8NGU4 316 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 GANCQ8TET4 914 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 ADAMTS14Q8WXS8 1223 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 GATA6Q92908 595 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 BIRC7Q96CA5 298 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 MYEOVQ96EZ4 313 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 CPXM1Q96SM3 734 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 TMEM121BQ9BXQ6 578 aaPredicted RBP12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 NDST4Q9H3R1 872 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM204AQ9H8W3 233 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 DDIT4Q9NX09 232 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 DNAJC12Q9UKB3 198 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 PCOLCE2Q9UKZ9 415 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 ANKRD6Q9Y2G4 727 aa12.58□□□□□ -0.4
GTF3C1-204ENST00000564664 A0A1B0GVM2 712 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 A0A1B0GVT2 93 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 A0A1W2PPC4 97 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 TCAF2A6NFQ2 919 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 C1QTNF9BB2RNN3 333 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 FOXN3O00409 490 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 HYAL3O43820 417 aaPredicted RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 PCDHGA12O60330 932 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 FSBPO95073 299 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 C1QTNF9P0C862 333 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 GOT1P17174 413 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SLC8A1P32418 973 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CLCN1P35523 988 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 NUDT1P36639 197 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SCNN1AP37088 669 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CCR5P51681 352 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 GALCP54803 685 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 RACK1P63244 317 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM193AP78312 1265 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 BNC1Q01954 994 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 ELAVL3Q14576 367 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 NUMA1Q14980 2115 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 TAF5Q15542 800 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CST6Q15828 149 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 KIF19Q2TAC6 998 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 C5orf22Q49AR2 442 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 VWA3BQ502W6 1294 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 OR6B2Q6IFH4 312 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SND1Q7KZF4 910 aaKnown RBP eCLIP12.57□□□□□ -0.42e-8■■■□□ 15.3
GTF3C1-204ENST00000564664 SLC26A9Q7LBE3 791 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 DSG4Q86SJ6 1040 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CACUL1Q86Y37 369 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM71AQ8IYT1 594 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CCAR2Q8N163 923 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 TMEM35BQ8NCS4 154 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 OR2T34Q8NGX1 318 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SETD7Q8WTS6 366 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SNX19Q92543 992 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 IGSF8Q969P0 613 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CAMK1GQ96NX5 476 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 FAM129BQ96TA1 746 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 OMDQ99983 421 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 KDM4CQ9H3R0 1056 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 CLSTN2Q9H4D0 955 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SYNCQ9H7C4 482 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 TM9SF3Q9HD45 589 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SIX2Q9NPC8 291 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 ACP6Q9NPH0 428 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 XPO7Q9UIA9 1087 aaKnown RBP12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 SLCO3A1Q9UIG8 710 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 PAXBP1Q9Y5B6 917 aa12.57□□□□□ -0.4
GTF3C1-204ENST00000564664 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.56□□□□□ -0.4
GTF3C1-204ENST00000564664 TTC34A8MYJ7 566 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms