RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	CTNNA1	P35221	906 aa	Known RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	ARL4A	P40617	200 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	CETN2	P41208	172 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	SSR1	P43307	286 aa	Known RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	ATXN1	P54253	815 aa	Known RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	CDH4	P55283	916 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	PRKCQ	Q04759	706 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	SEMA3B	Q13214	749 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	SLC12A1	Q13621	1099 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	MANEAL	Q5VSG8	457 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	RAP1GAP2	Q684P5	730 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	NADSYN1	Q6IA69	706 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	FBXL22	Q6P050	247 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	RHBDF2	Q6PJF5	856 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	ZNF783	Q6ZMS7	281 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	PEX26	Q7Z412	305 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	REXO1L1P	Q8IX06	675 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	CCAR2	Q8N163	923 aa	Known RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	CCDC185	Q8N715	623 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	UBL4B	Q8N7F7	174 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	DDI1	Q8WTU0	396 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	RSAD2	Q8WXG1	361 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	WBP2	Q969T9	261 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	RPRD1A	Q96P16	312 aa	Predicted RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	UHRF1	Q96T88	793 aa	Predicted RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	ZNF670	Q9BS34	389 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	RPP25	Q9BUL9	199 aa	Known RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	SNRNP25	Q9BV90	132 aa	Known RBP	10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	BBS2	Q9BXC9	721 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	ZYG11B	Q9C0D3	744 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	SIK2	Q9H0K1	926 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	LINC00597	Q9H2U6	94 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	EBF3	Q9H4W6	596 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	CATSPERB	Q9H7T0	1116 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	HPS4	Q9NQG7	708 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	PCSK1N	Q9UHG2	260 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	PCDHA3	Q9Y5H8	950 aa		10.21	□□□□□ -0.77
KNSTRN-215	ENST00000561367	C5orf42	Q9H799	3197 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CXorf51A	A0A1B0GTR3	108 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TMEM110-MUSTN1	A8MSY1	372 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	WASH4P	A8MWX3	477 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	PALM	O75781	387 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ZRANB2	O95218	330 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MOCS3	O95396	460 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ALAD	P13716	330 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TYR	P14679	529 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RHOQ	P17081	205 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CTNNA2	P26232	953 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	IL1R2	P27930	398 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	SLC6A4	P31645	630 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ETFB	P38117	255 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MAPKAPK2	P49137	400 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ANO4	Q32M45	955 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LY6G5C	Q5SRR4	150 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FYB2	Q5VWT5	728 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	SETD3	Q86TU7	594 aa	Predicted RBP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	NT5DC3	Q86UY8	548 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TMEM25	Q86YD3	366 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KATNAL2	Q8IYT4	538 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ZNF683	Q8IZ20	524 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RCOR2	Q8IZ40	523 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LGI2	Q8N0V4	545 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LZTR1	Q8N653	840 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	KCTD6	Q8NC69	237 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	EXD1	Q8NHP7	514 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FIBIN	Q8TAL6	211 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LRRN4	Q8WUT4	740 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CD101	Q93033	1021 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TBC1D31	Q96DN5	1066 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ASIC4	Q96FT7	647 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RBM41	Q96IZ5	413 aa	Known RBP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	PEBP4	Q96S96	227 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	NELL2	Q99435	816 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	DHX35	Q9H5Z1	703 aa	Known RBP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ANLN	Q9NQW6	1124 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TRIM10	Q9UDY6	481 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	FBXO10	Q9UK96	956 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	VANGL2	Q9ULK5	521 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TFR2	Q9UP52	801 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	EFR3B	Q9Y2G0	817 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	SLC27A6	Q9Y2P4	619 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	MRPS17	Q9Y2R5	130 aa	Known RBP	10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	CAPN6	Q9Y6Q1	641 aa		10.2	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	NEDD8-MDP1	E9PL57	170 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367		I6L893	689 aa	Predicted RBP	10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	EEF2K	O00418	725 aa	Known RBP	10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TIMM44	O43615	452 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LRIG2	O94898	1065 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	LUC7L3	O95232	432 aa	Known RBP	10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TUBB4A	P04350	444 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	ARSA	P15289	507 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	HOXD9	P28356	352 aa	Predicted RBP	10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	EPHB2	P29323	1055 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	GJA4	P35212	333 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	SERPINB6	P35237	376 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	RWDD2B	P57060	319 aa		10.19	□□□□□ -0.78
KNSTRN-215	ENST00000561367	TAS2R40	P59535	323 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms