RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GPNMBQ14956 572 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 PDK2Q15119 407 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 RAB30Q15771 203 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 CNGA3Q16281 694 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 TBC1D25Q3MII6 688 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 CCDC153Q494R4 210 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 UBAP2Q5T6F2 1119 aaKnown RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 CNKSR3Q6P9H4 555 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 TRAF7Q6Q0C0 670 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 MFSD7Q6UXD7 560 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 CDKL3Q8IVW4 592 aaPredicted RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 ARID3BQ8IVW6 561 aaPredicted RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 FBXW8Q8N3Y1 598 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 ZNF276Q8N554 614 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 GDPD5Q8WTR4 605 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 WDR60Q8WVS4 1066 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 KAT5Q92993 513 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 TOP1MTQ969P6 601 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 TIFAQ96CG3 184 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 BIRC8Q96P09 236 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 CGRRF1Q99675 332 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 RTKNQ9BST9 563 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 MSTO1Q9BUK6 570 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 TARS2Q9BW92 718 aaKnown RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 PBX4Q9BYU1 374 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 NUF2Q9BZD4 464 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 LHX5Q9H2C1 402 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 PTPRHQ9HD43 1115 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 GALNT8Q9NY28 637 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 PAIP2BQ9ULR5 123 aaKnown RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 PSMD13Q9UNM6 376 aa8.78□□□□□ -1
CCDC33-209ENST00000560565 HBS1LQ9Y450 684 aaKnown RBP8.78□□□□□ -1
CCDC33-209ENST00000560565 SCN1AP35498 2009 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 A0A087WZ62 844 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ABHD14A-ACY1A0A1B0GW23 586 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TCRBV9S1A1TA0A576 114 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 WDR91A4D1P6 747 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 SDR42E2A6NKP2 422 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TTLL13PA6NNM8 815 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TMEM114B3SHH9 223 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 EFCAB14O75071 495 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 IL18RAPO95256 599 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 HLA-DRAP01903 254 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ITGA2BP08514 1039 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 CTSHP09668 335 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 FAM58BPP0C7Q3 252 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ZCCHC18P0CG32 403 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 PYGBP11216 843 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 HARSP12081 509 aaKnown RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 MLNP12872 115 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 DNAJB1P25685 340 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 PSMA2P25787 234 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 GJC1P36383 396 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 PBX2P40425 430 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 HADHAP40939 763 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 HDAC4P56524 1084 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TAS2R40P59535 323 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 EIF3EP60228 445 aaKnown RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ESRRGP62508 458 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TUBA4AP68366 448 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 OTUD4Q01804 1114 aaKnown RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 CREB5Q02930 508 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 OVGP1Q12889 678 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ILF2Q12905 390 aaKnown RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 DPYSL3Q14195 570 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 MBTPS1Q14703 1052 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TRIP10Q15642 601 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 CHI3L2Q15782 390 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 DCAF4L1Q3SXM0 396 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 PLEKHG4Q58EX7 1191 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 OGFRL1Q5TC84 451 aaPredicted RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 FAXCQ5TGI0 409 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ATF7IP2Q5U623 682 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 IRAK1BP1Q5VVH5 260 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TMEM270Q6UE05 265 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ANKMY2Q8IV38 441 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 BRSK2Q8IWQ3 736 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 NUP93Q8N1F7 819 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 KCTD6Q8NC69 237 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 GSDMBQ8TAX9 411 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 PHOSPHO2Q8TCD6 241 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 SLC26A7Q8TE54 656 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 DNAJB3Q8WWF6 145 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 NLRP7Q8WX94 980 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 FAF2Q96CS3 445 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 RTP4Q96DX8 246 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 PANX3Q96QZ0 392 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TUBGCP5Q96RT8 1024 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TSPAN18Q96SJ8 248 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 SLC9A7Q96T83 725 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TBCBQ99426 244 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 CDX2Q99626 313 aaPredicted RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 FDXACB1Q9BRP7 624 aaPredicted RBP8.77□□□□□ -1.01
CCDC33-209ENST00000560565 ADPGKQ9BRR6 497 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 FAM213AQ9BRX8 229 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 TCHPQ9BT92 498 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 EFHD1Q9BUP0 239 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 DRC3Q9H069 523 aa8.77□□□□□ -1.01
CCDC33-209ENST00000560565 IKZF4Q9H2S9 585 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms