RNA–Protein interactions for RNA: ENST00000558731.1

CSPG4P5-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 5, humanhuman

BASIC

Gene CSPG4P5, Length 3,730 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5-201ENST00000558731 ZMYND8Q9ULU4 1186 aaPredicted RBP11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 RPS6KL1Q9Y6S9 549 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 TRIM49D1C9J1S8 452 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 PDE1BQ01064 536 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 QPCTQ16769 361 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 RAB41Q5JT25 222 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 CHMP6Q96FZ7 201 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 FSD1LQ9BXM9 530 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 SP110Q9HB58 689 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 MARCH5Q9NX47 278 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 BAIAP2L1Q9UHR4 511 aa11.09□□□□□ -0.63
CSPG4P5-201ENST00000558731 CCDC195A0A1B0GUA6 201 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CHADO15335 359 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 MT-CYBP00156 380 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CXCR3P49682 368 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 KCNJ11Q14654 390 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 GKAP1Q5VSY0 366 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 TGS1Q96RS0 853 aaKnown RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZCWPW1Q9H0M4 648 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CSNK1G1Q9HCP0 422 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 TLR8Q9NR97 1041 aaKnown RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 SYN3O14994 580 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 KIF1CO43896 1103 aaKnown RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 PEX19P40855 299 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CDK7P50613 346 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 KCNQ1P51787 676 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 DNAJC3Q13217 504 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 USP41Q3LFD5 358 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 SPDYCQ5MJ68 293 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 ANKS3Q6ZW76 656 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 RNF135Q8IUD6 432 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CACNA2D3Q8IZS8 1091 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 SPOCK2Q92563 424 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 TRIM62Q9BVG3 475 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 RBM22Q9NW64 420 aaKnown RBP eCLIP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 PITPNM1O00562 1244 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 OAZ2O95190 189 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 ALDH1A3P47895 512 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 ELAVL2Q12926 359 aaKnown RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZBTB17Q13105 803 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 PRPSAP1Q14558 356 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 POU6F1Q14863 301 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 SNCBQ16143 134 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 VSTM1Q6UX27 236 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 LRRC6Q86X45 466 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 CATSPERBQ9H7T0 1116 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 PCMTD2Q9NV79 361 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 RRN3Q9NYV6 651 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 BFARQ9NZS9 450 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 PRKAG2Q9UGJ0 569 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 RABGEF1Q9UJ41 708 aa11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.08□□□□□ -0.64
CSPG4P5-201ENST00000558731 E9PAM4 449 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 H7C4K7 107 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 CNTN5O94779 1100 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 ERVK-10P10266 1014 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 PTPN3P26045 913 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 RPA3P35244 121 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 NKX3-2P78367 333 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 FAM189BP81408 668 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 MPP2Q14168 576 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 RASIP1Q5U651 963 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 CAND1Q86VP6 1230 aaKnown RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 PPP1R14CQ8TAE6 165 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 WDR83Q9BRX9 315 aaKnown RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 TMEM106CQ9BVX2 250 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 NT5MQ9NPB1 228 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 GKN1Q9NS71 199 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 SYBUQ9NX95 663 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 ZFATQ9P243 1243 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 HS3ST4Q9Y661 456 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 TDRD15B5MCY1 1934 aaKnown RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 FAM47DPA6NHR8 397 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 OR6C75A6NL08 312 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 CXorf49A8MYA2 514 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 BNIP3LO60238 219 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 URODP06132 367 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 PYGBP11216 843 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 MMP13P45452 471 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 CERCAMQ5T4B2 595 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 LVRNQ6Q4G3 990 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 UNC5AQ6ZN44 842 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 C16orf59Q7L2K0 433 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 SLC43A3Q8NBI5 491 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 NSMCE1Q8WV22 266 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 PAK6Q9NQU5 681 aaPredicted RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 IQANK1A0A1B0GTG1 560 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 DCLK1O15075 740 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 LPXNO60711 386 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 OPHN1O60890 802 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 CLTBP09497 229 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 FAM163BP0C2L3 166 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 GARSP41250 739 aaKnown RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 DPYSQ14117 519 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 PM20D1Q6GTS8 502 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 DENND1CQ8IV53 801 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 LGI2Q8N0V4 545 aa11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 PDCD6IPQ8WUM4 868 aaKnown RBP11.07□□□□□ -0.64
CSPG4P5-201ENST00000558731 IRGQQ8WZA9 623 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms