RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 CCDC14Q49A88 953 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 C2CD6Q53TS8 623 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 EFHC2Q5JST6 749 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 PLEKHA7Q6IQ23 1121 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 ZNF571Q7Z3V5 609 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-222ENST00000557356 RABEPKQ7Z6M1 372 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 SLFN11Q7Z7L1 901 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 TMPRSS6Q8IU80 811 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 PSTKQ8IV42 348 aaKnown RBP8.09□□□□□ -1.11
PSEN1-222ENST00000557356 EMC1Q8N766 993 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 MDGA1Q8NFP4 955 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 OR2T3Q8NH03 318 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 FNIP1Q8TF40 1166 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 FOXJ1Q92949 421 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 NTAN1Q96AB6 310 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 SIPA1Q96FS4 1042 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 CCDC114Q96M63 670 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 PRICKLE1Q96MT3 831 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-222ENST00000557356 ACOX2Q99424 681 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 SYT11Q9BT88 431 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 C2orf49Q9BVC5 232 aaPredicted RBP8.09□□□□□ -1.11
PSEN1-222ENST00000557356 TRIM5Q9C035 493 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 ZYG11BQ9C0D3 744 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 ISCUQ9H1K1 167 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 PCED1AQ9H1Q7 454 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 TMEM245Q9H330 911 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 C2orf42Q9NWW7 574 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 CACNA2D2Q9NY47 1150 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 OR12D3Q9UGF7 316 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 ADAMTS1Q9UHI8 967 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 XPO7Q9UIA9 1087 aaKnown RBP8.09□□□□□ -1.11
PSEN1-222ENST00000557356 VANGL2Q9ULK5 521 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 TPX2Q9ULW0 747 aaKnown RBP8.09□□□□□ -1.11
PSEN1-222ENST00000557356 CLEC4EQ9ULY5 219 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 HPCAL4Q9UM19 191 aa8.09□□□□□ -1.11
PSEN1-222ENST00000557356 CACNA1IQ9P0X4 2223 aa8.09□□□□□ -1.12
PSEN1-222ENST00000557356 COL4A3Q01955 1670 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 MUC6Q6W4X9 2439 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 VCANP13611 3396 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 IGLV3-10A0A075B6K4 115 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 EDDM13A0A1B0GTR0 161 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SSU72P8A0A1W2PR75 194 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 TCRBV5S1A1TA0A578 114 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 ILVBLA1L0T0 632 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 TMCO5BA8MYB1 307 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 WASH3PC4AMC7 463 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 E9PAM4 449 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 DDX3XO00571 662 aaKnown RBP eCLIP8.08□□□□□ -1.127e-8■■□□□ 12.8
PSEN1-222ENST00000557356 SRGAP2O75044 1071 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 ADCY5O95622 1261 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CHRM1P11229 460 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-222ENST00000557356 RRM1P23921 792 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CASP14P31944 242 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 L1CAMP32004 1257 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CD70P32970 193 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 HOXD12P35452 270 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CSKP41240 450 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 IL12RB1P42701 662 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 WASP42768 502 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SGSHP51688 502 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 GEMIN4P57678 1058 aaKnown RBP8.08□□□□□ -1.12
PSEN1-222ENST00000557356 LMNB2Q03252 620 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 PIGHQ14442 188 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CSRP2Q16527 193 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CDO1Q16878 200 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 FUT11Q495W5 492 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 PLK5Q496M5 336 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 PITRM1Q5JRX3 1037 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SYCP2LQ5T4T6 812 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 TMEM215Q68D42 235 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 RETSATQ6NUM9 610 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SCYL2Q6P3W7 929 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 ALKBH5Q6P6C2 394 aaKnown RBP8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SARM1Q6SZW1 724 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 DSG4Q86SJ6 1040 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 FAM131BQ86XD5 332 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CNGA4Q8IV77 575 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SFTPA1Q8IWL2 248 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 FAM160A2Q8N612 972 aaPredicted RBP8.08□□□□□ -1.12
PSEN1-222ENST00000557356 RNF214Q8ND24 703 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 JOSD2Q8TAC2 188 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 FAM172AQ8WUF8 416 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 LMLNQ96KR4 655 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 MRGPRX1Q96LB2 322 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 MCEEQ96PE7 176 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 FEM1AQ9BSK4 669 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 MUC3BQ9H195 1237 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 DEF6Q9H4E7 631 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CATSPERBQ9H7T0 1116 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 ITM2CQ9NQX7 267 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 CNOT8Q9UFF9 292 aaKnown RBP8.08□□□□□ -1.12
PSEN1-222ENST00000557356 SLC25A13Q9UJS0 675 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 VPS28Q9UK41 221 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 ERVW-1Q9UQF0 538 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 NCKAP1Q9Y2A7 1128 aa8.08□□□□□ -1.12
PSEN1-222ENST00000557356 TMEM191CA6NGB0 347 aa8.07□□□□□ -1.12
PSEN1-222ENST00000557356 PRPSAP2O60256 369 aa8.07□□□□□ -1.12
PSEN1-222ENST00000557356 DNTTP04053 509 aa8.07□□□□□ -1.12
PSEN1-222ENST00000557356 GYPCP04921 128 aa8.07□□□□□ -1.12
PSEN1-222ENST00000557356 RHOCP08134 193 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms