RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 PANK2Q9BZ23 570 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TPSD1Q9BZJ3 242 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 IQCGQ9H095 443 aaKnown RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 CDT1Q9H211 546 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 ECT2Q9H8V3 914 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 KIF9Q9HAQ2 790 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 PLEKHA5Q9HAU0 1116 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TMEM74BQ9NUR3 256 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 TDP1Q9NUW8 608 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 CPSF2Q9P2I0 782 aaKnown RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MBD1Q9UIS9 605 aaPredicted RBP5.21□□□□□ -1.58
ATXN3-247ENST00000557311 PILRBQ9UKJ0 227 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 DOCK6Q96HP0 2047 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 NOTCH4Q99466 2003 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 CEP295Q9C0D2 2601 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 PHLPP2Q6ZVD8 1323 aa5.21□□□□□ -1.58
ATXN3-247ENST00000557311 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 K7EQS6 105 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 ABLIM1O14639 778 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 MED24O75448 989 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SOAT2O75908 522 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CDKL5O76039 1030 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 LARGE1O95461 756 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 TSPAN15O95858 294 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SERPINF2P08697 491 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CCDC175P0C221 793 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SKILP12757 684 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CD59P13987 128 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 PROZP22891 400 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 U2AF2P26368 475 aaKnown RBP eCLIP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CFPP27918 469 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 LRPAP1P30533 357 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 P2RY2P41231 377 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 ECI1P42126 302 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 PTGER3P43115 390 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF143P52747 638 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 MRPS21P82921 87 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SCRN1Q12765 414 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SMARCB1Q12824 385 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 ZBTB6Q15916 424 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CRY1Q16526 586 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 MGAT5BQ3V5L5 792 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 C2orf27AQ580R0 203 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 EARS2Q5JPH6 523 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 LYSMD4Q5XG99 296 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 RABEPKQ7Z6M1 372 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 TMEFF1Q8IYR6 380 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 ERMNQ8TAM6 284 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 C2orf15Q8WU43 125 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 OSCP1Q8WVF1 389 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 MRPS31Q92665 395 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 MTMR9Q96QG7 549 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 FNBP1Q96RU3 617 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SEPT5Q99719 369 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 MCMBPQ9BTE3 642 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 TARS2Q9BW92 718 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 GTPBP2Q9BX10 602 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 ZNF552Q9H707 407 aaPredicted RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 POLD4Q9HCU8 107 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 DUS2Q9NX74 493 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 DKK4Q9UBT3 224 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SUSD2Q9UGT4 822 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CNOT6Q9ULM6 557 aaKnown RBP5.2□□□□□ -1.58
ATXN3-247ENST00000557311 CCL26Q9Y258 94 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 JRKLQ9Y4A0 524 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SNX14Q9Y5W7 946 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 COMMD10Q9Y6G5 202 aa5.2□□□□□ -1.58
ATXN3-247ENST00000557311 SPEGQ15772 3267 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 IGF2RP11717 2491 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 FRYQ5TBA9 3013 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TRBV23OR9-2A0A075B6M9 112 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MYMKA6NI61 221 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 CCDC169A6NNP5 214 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 XPOTO43592 962 aaKnown RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 SUSD5O60279 629 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 NUAK1O60285 661 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 NPHS1O60500 1241 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 NEMFO60524 1076 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 TOM1L1O75674 476 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 GJB6O95452 261 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 CFIP05156 583 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 SNRPB2P08579 225 aaKnown RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 CLTAP09496 248 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 FTH1P19P0C7X4 201 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MSL3P1P0C860 447 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 HAPLN1P10915 354 aaPredicted RBP5.19□□□□□ -1.58
ATXN3-247ENST00000557311 VDRP11473 427 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 PLS3P13797 630 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 ATF6P18850 670 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MUTP22033 750 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 RPA1P27694 616 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 VIPR1P32241 457 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 KRT2P35908 639 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 NPTX2P47972 431 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 IFNAR2P48551 515 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 PEX3P56589 373 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 LILRA4P59901 499 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 DLG4P78352 724 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 MVKQ03426 396 aa5.19□□□□□ -1.58
ATXN3-247ENST00000557311 ADCY2Q08462 1091 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms