RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 AKAP8O43823 692 aaKnown RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 ZNF217O75362 1048 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 CDK4P11802 303 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 IL12RB1P42701 662 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TNFRSF4P43489 277 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 GIPRP48546 466 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 RARRES1P49788 294 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 EFNA5P52803 228 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 NLRP5P59047 1200 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 AKAP17AQ02040 695 aaKnown RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 SMARCB1Q12824 385 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 VEPH1Q14D04 833 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 NECTIN1Q15223 517 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TAF1BQ53T94 588 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 EOGTQ5NDL2 527 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 SYCP2LQ5T4T6 812 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TXNDC8Q6A555 127 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 GALNT17Q6IS24 598 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 ARMCX5Q6P1M9 558 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 POMZP3Q6PJE2 187 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 IL27RAQ6UWB1 636 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 USP37Q86T82 979 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TMEM150AQ86TG1 271 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 MARCH9Q86YJ5 346 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 FAM177A1Q8N128 213 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 KIAA1958Q8N8K9 716 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TRIML1Q8N9V2 468 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 IL17RCQ8NAC3 791 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TXNDC5Q8NBS9 432 aaKnown RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 MCPH1Q8NEM0 835 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 PLEKHO2Q8TD55 490 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 SETD7Q8WTS6 366 aaKnown RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 DNASE2BQ8WZ79 361 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 SEC14L1Q92503 715 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 HAS1Q92839 578 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 FGF11Q92914 225 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 DYDC2Q96IM9 177 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 PGLYRP2Q96PD5 576 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 GCNAQ96QF7 691 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 CCDC113Q9H0I3 377 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 POLR3FQ9H1D9 316 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-223ENST00000557076 LINC00597Q9H2U6 94 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 PTPRHQ9HD43 1115 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 PCDHB10Q9UN67 800 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TNFSF13BQ9Y275 285 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 DOPEY1Q5JWR5 2465 aa5.08□□□□□ -1.6
SCFD1-223ENST00000557076 TDRD15B5MCY1 1934 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 ANKRD17O75179 2603 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 MTMR11A4FU01 709 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 ANKRD34BA5PLL1 514 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 FAM149AA5PLN7 773 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 MYMKA6NI61 221 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SGK1O00141 431 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 TLX3O43711 291 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SLC37A4O43826 429 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 LARGE1O95461 756 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 KLF8O95600 359 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 OR4Q2P0C623 313 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 NAT2P11245 290 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 TCF3P15923 654 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 GCFC2P16383 781 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 HMGA1P17096 107 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 TYMPP19971 482 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 ATP2B1P20020 1258 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 PAX3P23760 479 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 OPRD1P41143 372 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 EIF2DP41214 584 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SLC6A11P48066 632 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 AARSP49588 968 aaKnown RBP eCLIP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 RACK1P63244 317 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SEMG2Q02383 582 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 TLE3Q04726 772 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 MTF1Q14872 753 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SURF1Q15526 300 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 NTRK3Q16288 839 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 TAF12Q16514 161 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 PREPLQ4J6C6 727 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 WDR45BQ5MNZ6 344 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 ATF7IP2Q5U623 682 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 EMC10Q5UCC4 262 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 CREB3L3Q68CJ9 461 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 CD300LDQ6UXZ3 194 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 TTC30AQ86WT1 665 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 FMNL3Q8IVF7 1028 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SLC41A1Q8IVJ1 513 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 EFCAB13Q8IY85 973 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 DEFB119Q8N690 84 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 ALLCQ8N6M5 410 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 LRRC15Q8TF66 581 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 SNRNP27Q8WVK2 155 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 HMGB4Q8WW32 186 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 KLHL6Q8WZ60 621 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 MRPS31Q92665 395 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 DVL3Q92997 716 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 C18orf25Q96B23 403 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 NXPE2Q96DL1 559 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 ACAP3Q96P50 834 aa5.07□□□□□ -1.6
SCFD1-223ENST00000557076 EIF2AK1Q9BQI3 630 aaKnown RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 CCDC94Q9BW85 323 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-223ENST00000557076 RNF26Q9BY78 433 aaPredicted RBP5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms