RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CXorf57Q6NSI4 855 aaKnown RBP23.57■■□□□ 1.36
TDP1-216ENST00000556867 VPS36Q86VN1 386 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 VSTM4Q8IW00 320 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 FAM172AQ8WUF8 416 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 RUBCNQ92622 972 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 TMEM245Q9H330 911 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 PARVAQ9NVD7 372 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 SNX10Q9Y5X0 201 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 SDK1Q7Z5N4 2213 aa23.57■■□□□ 1.36
TDP1-216ENST00000556867 ZNF292O60281 2723 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 IGLV3-10A0A075B6K4 115 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 ZBTB24O43167 697 aaPredicted RBP23.56■■□□□ 1.36
TDP1-216ENST00000556867 CCP110O43303 1012 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 CLDN11O75508 207 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 MOCS3O95396 460 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 HNRNPH3P31942 346 aaKnown RBP23.56■■□□□ 1.36
TDP1-216ENST00000556867 CDH4P55283 916 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 MAMLD1Q13495 774 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 LPAL2Q16609 132 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 PLEKHG6Q3KR16 790 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 ARL13BQ3SXY8 428 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 FNDC3BQ53EP0 1204 aaKnown RBP23.56■■□□□ 1.36
TDP1-216ENST00000556867 ARTNQ5T4W7 220 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 DCUN1D2Q6PH85 259 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 SARM1Q6SZW1 724 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 LRRC31Q6UY01 552 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 C11orf74Q86VG3 221 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 TRIM11Q96F44 468 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 CNPY3Q9BT09 278 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 ISCUQ9H1K1 167 aa23.56■■□□□ 1.36
TDP1-216ENST00000556867 DRGXA6NNA5 263 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 E9PAM4 449 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 ATMINO43313 823 aaPredicted RBP23.55■■□□□ 1.36
TDP1-216ENST00000556867 PLEKP08567 350 aaPredicted RBP23.55■■□□□ 1.36
TDP1-216ENST00000556867 NDUFV2P19404 249 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 ADRA1BP35368 520 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 P2RY2P41231 377 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 PLK1P53350 603 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.55■■□□□ 1.36
TDP1-216ENST00000556867 KBTBD6Q86V97 674 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 DNAAF5Q86Y56 855 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 PGBD3Q8N328 593 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 FAM160A2Q8N612 972 aaPredicted RBP23.55■■□□□ 1.36
TDP1-216ENST00000556867 NTAN1Q96AB6 310 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 ZC3H10Q96K80 434 aaKnown RBP23.55■■□□□ 1.36
TDP1-216ENST00000556867 NCDNQ9UBB6 729 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 ADAMTS1Q9UHI8 967 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 GMEB2Q9UKD1 530 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 TBC1D30Q9Y2I9 924 aa23.55■■□□□ 1.36
TDP1-216ENST00000556867 ABCA7Q8IZY2 2146 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP23.54■■□□□ 1.36
TDP1-216ENST00000556867 SYNCRIPO60506 623 aaKnown RBP23.54■■□□□ 1.36
TDP1-216ENST00000556867 CNTN5O94779 1100 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 EPHX1P07099 455 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 MYBL1P10243 752 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 NRG1Q02297 640 aaPredicted RBP23.54■■□□□ 1.36
TDP1-216ENST00000556867 ZNF177Q13360 481 aaPredicted RBP23.54■■□□□ 1.36
TDP1-216ENST00000556867 ARID5BQ14865 1188 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 ALFQ53S48 1182 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 DRC7Q8IY82 874 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 APCDD1Q8J025 514 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 KDM1BQ8NB78 822 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 ZNF653Q96CK0 615 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 ERLEC1Q96DZ1 483 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 SPACA7Q96KW9 195 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 MRGPRX1Q96LB2 322 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 DNAJC7Q99615 494 aa23.54■■□□□ 1.36
TDP1-216ENST00000556867 DCLK1O15075 740 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 RETP07949 1114 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 HLA-EP13747 358 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 DESP17661 470 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 MZF1P28698 734 aaPredicted RBP23.53■■□□□ 1.36
TDP1-216ENST00000556867 OGDHQ02218 1023 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 SCAPQ12770 1279 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 CAMK2GQ13555 558 aaPredicted RBP23.53■■□□□ 1.36
TDP1-216ENST00000556867 BYSLQ13895 437 aaKnown RBP23.53■■□□□ 1.36
TDP1-216ENST00000556867 MAP7D1Q3KQU3 841 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 PLK5Q496M5 336 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 MANEALQ5VSG8 457 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 OR52K2Q8NGK3 314 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 ALG14Q96F25 216 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 MYO19Q96H55 970 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 LOXL4Q96JB6 756 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 MRGPRX3Q96LB0 322 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 PPP1R9BQ96SB3 815 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP23.53■■□□□ 1.36
TDP1-216ENST00000556867 OSBPL2Q9H1P3 480 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 DUSP15Q9H1R2 295 aaPredicted RBP23.53■■□□□ 1.36
TDP1-216ENST00000556867 ARHGAP20Q9P2F6 1191 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 CNOT8Q9UFF9 292 aaKnown RBP23.53■■□□□ 1.36
TDP1-216ENST00000556867 INVSQ9Y283 1065 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 SCINQ9Y6U3 715 aa23.53■■□□□ 1.36
TDP1-216ENST00000556867 SRPRAP08240 638 aaKnown RBP23.52■■□□□ 1.36
TDP1-216ENST00000556867 ST8SIA6P61647 398 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 ECT2LQ008S8 904 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 SULT2A1Q06520 285 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 TMC6Q7Z403 805 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 CCDC185Q8N715 623 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 OR8K1Q8NGG5 319 aa23.52■■□□□ 1.36
TDP1-216ENST00000556867 RLN3Q8WXF3 142 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms