RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 PITRM1Q5JRX3 1037 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 SH3PXD2AQ5TCZ1 1133 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 ZNF776Q68DI1 518 aaPredicted RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 IL27RAQ6UWB1 636 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 ERICH1Q86X53 443 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 DEFB119Q8N690 84 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 ANKRD20A12PQ8NF67 263 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 MRGPRX3Q96LB0 322 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 BTBD1Q9H0C5 482 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 RSPH9Q9H1X1 276 aaPredicted RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 CD93Q9NPY3 652 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 DNAAF2Q9NVR5 837 aaKnown RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.02□□□□□ -0.33
SNX6-207ENST00000556303 XPO7Q9UIA9 1087 aaKnown RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 TPX2Q9ULW0 747 aaKnown RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 ERVW-1Q9UQF0 538 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 ITIH6Q6UXX5 1313 aa13.02□□□□□ -0.33
SNX6-207ENST00000556303 ATXN2Q99700 1313 aaKnown RBP13.02□□□□□ -0.33
SNX6-207ENST00000556303 LRRC10BA6NIK2 292 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 F8VZ95 297 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 CLDN11O75508 207 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 MBD3O95983 291 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 PITX1P78337 314 aaPredicted RBP13.01□□□□□ -0.33
SNX6-207ENST00000556303 SEMA3BQ13214 749 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 AUHQ13825 339 aaKnown RBP13.01□□□□□ -0.33
SNX6-207ENST00000556303 KRT31Q15323 416 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 UAP1L1Q3KQV9 507 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 HSP90AA4PQ58FG1 418 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 FSCBQ5H9T9 825 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 FKBP15Q5T1M5 1219 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 RNF219Q5W0B1 726 aaPredicted RBP13.01□□□□□ -0.33
SNX6-207ENST00000556303 PSAPL1Q6NUJ1 521 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 SASS6Q6UVJ0 657 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 SND1Q7KZF4 910 aaKnown RBP eCLIP13.01□□□□□ -0.33
SNX6-207ENST00000556303 PIP4P1Q86T03 277 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 CCAR2Q8N163 923 aaKnown RBP13.01□□□□□ -0.33
SNX6-207ENST00000556303 CFAP52Q8N1V2 620 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 ERLEC1Q96DZ1 483 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 MYEOVQ96EZ4 313 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 C1orf74Q96LT6 269 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 NPY6RQ99463 290 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 WDCPQ9H6R7 721 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 ARHGEF38Q9NXL2 777 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 ANGPTL2Q9UKU9 493 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 NUMA1Q14980 2115 aa13.01□□□□□ -0.33
SNX6-207ENST00000556303 MUC22E2RYF6 1773 aaPredicted RBP13□□□□□ -0.33
SNX6-207ENST00000556303 EDDM13A0A1B0GTR0 161 aa13□□□□□ -0.33
SNX6-207ENST00000556303 M0QYT0 321 aa13□□□□□ -0.33
SNX6-207ENST00000556303 BCAT2O15382 392 aaPredicted RBP13□□□□□ -0.33
SNX6-207ENST00000556303 GRAP2O75791 330 aa13□□□□□ -0.33
SNX6-207ENST00000556303 ZNF883P0CG24 379 aa13□□□□□ -0.33
SNX6-207ENST00000556303 MAPK8P45983 427 aa13□□□□□ -0.33
SNX6-207ENST00000556303 CXCR3P49682 368 aa13□□□□□ -0.33
SNX6-207ENST00000556303 SLC25A52Q3SY17 297 aa13□□□□□ -0.33
SNX6-207ENST00000556303 C9orf64Q5T6V5 341 aa13□□□□□ -0.33
SNX6-207ENST00000556303 FBXL22Q6P050 247 aa13□□□□□ -0.33
SNX6-207ENST00000556303 XYLT1Q86Y38 959 aa13□□□□□ -0.33
SNX6-207ENST00000556303 MINDY1Q8N5J2 469 aa13□□□□□ -0.33
SNX6-207ENST00000556303 C1orf216Q8TAB5 229 aa13□□□□□ -0.33
SNX6-207ENST00000556303 EPS8L1Q8TE68 723 aa13□□□□□ -0.33
SNX6-207ENST00000556303 RPRD1AQ96P16 312 aaPredicted RBP13□□□□□ -0.33
SNX6-207ENST00000556303 GTPBP2Q9BX10 602 aaKnown RBP13□□□□□ -0.33
SNX6-207ENST00000556303 HS3ST4Q9Y661 456 aa13□□□□□ -0.33
SNX6-207ENST00000556303 MAP1BP46821 2468 aaKnown RBP13□□□□□ -0.33
SNX6-207ENST00000556303 PCDH15Q96QU1 1955 aa13□□□□□ -0.33
SNX6-207ENST00000556303 SYNJ2BP-COX16A0A087WUM0 186 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 GJB3O75712 270 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 SEMA4FO95754 770 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 PNMA6AP0CW24 399 aaPredicted RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 ACSL1P33121 698 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 AFF3P51826 1226 aaKnown RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 CDH4P55283 916 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 MYL5Q02045 173 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 NME3Q13232 169 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 ZNF177Q13360 481 aaPredicted RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 STX1AQ16623 288 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 LRSAM1Q6UWE0 723 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 TRIM72Q6ZMU5 477 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 MMS22LQ6ZRQ5 1243 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 ZNF366Q8N895 744 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 HAPLN3Q96S86 360 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 VPS16Q9H269 839 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 GANQ9H2C0 597 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 PABPC3Q9H361 631 aaKnown RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 RETREG1Q9H6L5 497 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 FANCLQ9NW38 375 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 TAB2Q9NYJ8 693 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 COX16Q9P0S2 106 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 LIMA1Q9UHB6 759 aaKnown RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 ADAMTS1Q9UHI8 967 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 FZD4Q9ULV1 537 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 TBC1D30Q9Y2I9 924 aa12.99□□□□□ -0.33
SNX6-207ENST00000556303 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.99□□□□□ -0.33
SNX6-207ENST00000556303 ASPMQ8IZT6 3477 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms