RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 KRT18P05783 430 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 FAM163BP0C2L3 166 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 PNLIPP16233 465 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 HDCP19113 662 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 LMO2P25791 158 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 GJB2P29033 226 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 OPRD1P41143 372 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 MRPS21P82921 87 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 RBP5P82980 135 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 TFAMQ00059 246 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 MYL7Q01449 175 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 CREB5Q02930 508 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 SOWAHAQ2M3V2 549 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 USP39Q53GS9 565 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 PMS2CLQ68D20 193 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 VSTM1Q6UX27 236 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 BRSK2Q8IWQ3 736 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ARL14EPQ8N8R7 260 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 FSIP1Q8NA03 581 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 STKLD1Q8NE28 680 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 SH3RF2Q8TEC5 729 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 EPSTI1Q96J88 318 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 FCRL3Q96P31 734 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ACCSQ96QU6 501 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 FAM213AQ9BRX8 229 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 KRTAP9-9Q9BYP9 154 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 KRTAP9-4Q9BYQ2 154 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 RNF38Q9H0F5 515 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 SUSD2Q9UGT4 822 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ITGA11Q9UKX5 1188 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 WNT6Q9Y6F9 365 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 EML5Q05BV3 1969 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 FAM208BQ5VWN6 2430 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 LNP1A1A4G5 178 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 FRMD3A2A2Y4 597 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 C2orf78A6NCI8 922 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ZNF840PA6NDX5 716 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ANTXRLA6NF34 631 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ATP2C2O75185 946 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 TMEM253P0C7T8 217 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 MED14OSP0DP75 135 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 HNRNPLP14866 589 aaKnown RBP eCLIP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 GAP43P17677 238 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 GLDCP23378 1020 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ACAT1P24752 427 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 PCSK1P29120 753 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 NOP2P46087 812 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 PPP3CCP48454 512 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 IFNAR2P48551 515 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 DGKEP52429 567 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 IRX4P78413 519 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 SLC7A9P82251 487 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 POU4F1Q01851 419 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 RABEP1Q15276 862 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 SF3A1Q15459 793 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 CRY1Q16526 586 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 CCDC142Q17RM4 750 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 SPDYCQ5MJ68 293 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 L1TD1Q5T7N2 865 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 DAB2IPQ5VWQ8 1189 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 KIAA1211LQ6NV74 962 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ATG14Q6ZNE5 492 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ADAT2Q7Z6V5 191 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 SFR1Q86XK3 245 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 CNOT6LQ96LI5 555 aaKnown RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 TTLL2Q9BWV7 592 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 INTS13Q9NVM9 706 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 IMPACTQ9P2X3 320 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 EVLQ9UI08 416 aaPredicted RBP9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 EXOC7Q9UPT5 735 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 SNX9Q9Y5X1 595 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 ATRXP46100 2492 aa9.53□□□□□ -0.88
GTF2A1-204ENST00000556268 LEFTY2O00292 366 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 HCRTO43612 131 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 PPM1BO75688 479 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 NFATC1O95644 943 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 OLFM2O95897 454 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 CKMP06732 381 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 PRKCAP17252 672 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 BCKDHBP21953 392 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 PDE6CP51160 858 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 NOVA1P51513 510 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 NOP14P78316 857 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 LARP1BQ659C4 914 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 RHBDF2Q6PJF5 856 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 CYP2R1Q6VVX0 501 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 BRAPQ7Z569 592 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 SPATA2LQ8IUW3 424 aaPredicted RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 NUP43Q8NFH3 380 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 TSTD1Q8NFU3 115 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 KBTBD7Q8WVZ9 684 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 SAAL1Q96ER3 474 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 CBWD1Q9BRT8 395 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 MCMBPQ9BTE3 642 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 EDEM2Q9BV94 578 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 MRPL44Q9H9J2 332 aaKnown RBP9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 PDE11AQ9HCR9 933 aa9.52□□□□□ -0.89
GTF2A1-204ENST00000556268 TRPC7Q9HCX4 862 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms