RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 MAGEL2Q9UJ55 1249 aa4.51□□□□□ -1.69
CPSF2-204ENST00000555244 CD207Q9UJ71 328 aa4.51□□□□□ -1.69
CPSF2-204ENST00000555244 MTMR6Q9Y217 621 aa4.51□□□□□ -1.69
CPSF2-204ENST00000555244 SSX2IPQ9Y2D8 614 aa4.51□□□□□ -1.69
CPSF2-204ENST00000555244 ZDHHC9Q9Y397 364 aa4.51□□□□□ -1.69
CPSF2-204ENST00000555244 SRPRBQ9Y5M8 271 aaKnown RBP4.51□□□□□ -1.69
CPSF2-204ENST00000555244 TCF20Q9UGU0 1960 aaKnown RBP4.51□□□□□ -1.69
CPSF2-204ENST00000555244 MUC6Q6W4X9 2439 aa4.51□□□□□ -1.69
CPSF2-204ENST00000555244 CACNA1HO95180 2353 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 LRRIQ4A6NIV6 560 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 E9PMD0 336 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 H0YCG3 227 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 H3BQ06 376 aaPredicted RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 K7ERI5 159 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PTGESO14684 152 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 LINC01565O15544 149 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 NDUFS2O75306 463 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SEC24DO94855 1032 aaPredicted RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CXCL14O95715 111 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SCGB1D2O95969 90 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PRKCBP05771 671 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CELA3BP08861 270 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 POU2F2P09086 479 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PLA2G4BP0C869 781 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 MCF2P10911 925 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ALADP13716 330 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 KCNE1P15382 129 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CDC25AP30304 524 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 DDIT3P35638 169 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ADKP55263 362 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ITIH3Q06033 890 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 MGAT5Q09328 741 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 GRIK3Q13003 919 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 MALLQ13021 153 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PRPF4BQ13523 1007 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ODF1Q14990 250 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SLC39A14Q15043 492 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PTPN14Q15678 1187 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 HERC4Q5GLZ8 1057 aaPredicted RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SPOUT1Q5T280 376 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CCDC181Q5TID7 509 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ATF7IP2Q5U623 682 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 TRIM68Q6AZZ1 485 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ATL3Q6DD88 541 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CXorf57Q6NSI4 855 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CD300LGQ6UXG3 332 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 C15orf39Q6ZRI6 1047 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 GAREM2Q75VX8 874 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 APBB1IPQ7Z5R6 666 aaPredicted RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 VPS52Q8N1B4 723 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 MYO1HQ8N1T3 1032 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PPP1R14CQ8TAE6 165 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 DEPTORQ8TB45 409 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 LRRC15Q8TF66 581 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 TSPEARQ8WU66 669 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CPB2Q96IY4 423 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 C20orf173Q96LM9 149 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 CCDC43Q96MW1 224 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 NECTIN4Q96NY8 510 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PPP1R10Q96QC0 940 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SLC2A13Q96QE2 648 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 RPS6KC1Q96S38 1066 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 FIZ1Q96SL8 496 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SPATA25Q9BR10 227 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ADI1Q9BV57 179 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 HERC2P3Q9BVR0 1158 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 COLEC11Q9BWP8 271 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PHF7Q9BWX1 381 aaPredicted RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 STRA6Q9BX79 667 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 C1QTNF1Q9BXJ1 281 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ADAM7Q9H2U9 754 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 NXF3Q9H4D5 531 aaKnown RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 PLEKHA5Q9HAU0 1116 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 FBXO2Q9UK22 296 aaPredicted RBP4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ADAM29Q9UKF5 820 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ODF2LQ9ULJ1 636 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 STYXL1Q9Y6J8 313 aa4.5□□□□□ -1.69
CPSF2-204ENST00000555244 ZDBF2Q9HCK1 2354 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 A0A0A6YYK5 440 aaPredicted RBP4.49□□□□□ -1.69
CPSF2-204ENST00000555244 A0A1B0GTL3 188 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 FRMD3A2A2Y4 597 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 VWA3AA6NCI4 1184 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 MROH6A6NGR9 719 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 NT5C1B-RDH14C9J2C7 533 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 PER2O15055 1255 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 STX6O43752 255 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 FAM189A1O60320 539 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 TBC1D4O60343 1298 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 TRIM13O60858 407 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 PHF2O75151 1096 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 ZC3H11AO75152 810 aaKnown RBP eCLIP4.49□□□□□ -1.69
CPSF2-204ENST00000555244 PPP6R2O75170 966 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 TOM1L1O75674 476 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 RECQL4O94761 1208 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 POMCP01189 267 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 THP07101 528 aa4.49□□□□□ -1.69
CPSF2-204ENST00000555244 CNPP09543 421 aaKnown RBP4.49□□□□□ -1.69
CPSF2-204ENST00000555244 SRGAP2BP0DMP2 458 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms