RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 SP110Q9HB58 689 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 RXFP1Q9HBX9 757 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 TMEM30AQ9NV96 361 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 STK39Q9UEW8 545 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 KLF15Q9UIH9 416 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 GGT7Q9UJ14 662 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 CLEC4EQ9ULY5 219 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 FCF1Q9Y324 198 aaKnown RBP2.59□□□□□ -1.99
PRPF39-205ENST00000554081 IRAK3Q9Y616 596 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 STON1Q9Y6Q2 735 aa2.59□□□□□ -1.99
PRPF39-205ENST00000554081 ZFP37Q9Y6Q3 630 aaPredicted RBP2.59□□□□□ -1.99
PRPF39-205ENST00000554081 CACNA1DQ01668 2161 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 THSD7BQ9C0I4 1608 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 BAHCC1Q9P281 2608 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ZNF292O60281 2723 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 LRRD1A4D1F6 860 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 PDZK1P1A8MUH7 402 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 TTC34A8MYJ7 566 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 GOLGA6L6A8MZA4 724 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 LOC730098B7Z3J9 87 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 PRRT4C9JH25 899 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 DDX3XO00571 662 aaKnown RBP eCLIP2.59□□□□□ -2
PRPF39-205ENST00000554081 INPP4BO15327 924 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 EIF3DO15371 548 aaKnown RBP eCLIP2.59□□□□□ -2
PRPF39-205ENST00000554081 AP5Z1O43299 807 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 LATO43561 262 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 PRPSAP2O60256 369 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 OPHN1O60890 802 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ABLIM3O94929 683 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 VNN1O95497 513 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 PABPC1P11940 636 aaKnown RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 ITIH2P19823 946 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 TBXAS1P24557 533 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 MZF1P28698 734 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 LRPAP1P30533 357 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 CCR1P32246 355 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ARL1P40616 181 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 CSKP41240 450 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 CTSOP43234 321 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 MARSP56192 900 aaKnown RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 SNX16P57768 344 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 NKX3-2P78367 333 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 MYL5Q02045 173 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 CYP4F3Q08477 520 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ZNF252P-AS1Q0IIN9 211 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 DNAJC3Q13217 504 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ZNF235Q14590 738 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 DLG2Q15700 870 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 CDKN3Q16667 212 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 FUT11Q495W5 492 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 PRRT3Q5FWE3 981 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 FAXCQ5TGI0 409 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 C11orf57Q6ZUT1 292 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 RALGPS2Q86X27 583 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 FAM129CQ86XR2 697 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 FMR1NBQ8N0W7 255 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 SPEM1Q8N4L4 309 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 MINDY1Q8N5J2 469 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ATP6V0D2Q8N8Y2 350 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 MDM1Q8TC05 714 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 SLC20A1Q8WUM9 679 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 OSCP1Q8WVF1 389 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 KBTBD7Q8WVZ9 684 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 NXPE3Q969Y0 559 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ARRDC3Q96B67 414 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 SKA1Q96BD8 255 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ALKBH8Q96BT7 664 aaKnown RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 FCRL2Q96LA5 508 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 ALS2CR12Q96Q35 445 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 MED15Q96RN5 788 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 HEMGNQ9BXL5 484 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 DUSP16Q9BY84 665 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ACE2Q9BYF1 805 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 MAGEB5Q9BZ81 275 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 MKRN2Q9H000 416 aaKnown RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 ZCWPW1Q9H0M4 648 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 TMEM9BQ9NQ34 198 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 ZSCAN32Q9NX65 697 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 EVLQ9UI08 416 aaPredicted RBP2.59□□□□□ -2
PRPF39-205ENST00000554081 CD84Q9UIB8 345 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 SHOC2Q9UQ13 582 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 COQ6Q9Y2Z9 468 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 TRIP11Q15643 1979 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 TLN2Q9Y4G6 2542 aa2.59□□□□□ -2
PRPF39-205ENST00000554081 TEP1Q99973 2627 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 H0Y8X5 98 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MYO1FO00160 1098 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RTN2O75298 545 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 PALMO75781 387 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RASSF9O75901 435 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RHOBTB1O94844 696 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RHOBTB3O94955 611 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RASGRP1O95267 797 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 RECKO95980 971 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 MT-CO1P00395 513 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 F11P03951 625 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 C4BPAP04003 597 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 HMGA1P17096 107 aaKnown RBP2.58□□□□□ -2
PRPF39-205ENST00000554081 CTPS1P17812 591 aa2.58□□□□□ -2
PRPF39-205ENST00000554081 CYP3A5P20815 502 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms