RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 LIASO43766 372 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 ZBTB14O43829 449 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 SNX2O60749 519 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 NADKO95544 446 aaPredicted RBP9.76□□□□□ -0.85
SIX4-202ENST00000554079 TSHRP16473 764 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 YBX3P16989 372 aaKnown RBP eCLIP9.76□□□□□ -0.85
SIX4-202ENST00000554079 JUNBP17275 347 aaPredicted RBP9.76□□□□□ -0.85
SIX4-202ENST00000554079 HADHAP40939 763 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 PTPN9P43378 593 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 PRAMEP78395 509 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 OCA2Q04671 838 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 PTP4A2Q12974 167 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 TRPC3Q13507 836 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 BMT2Q1RMZ1 405 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 MTX3Q5HYI7 312 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 FNBP1LQ5T0N5 605 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 HMBOX1Q6NT76 420 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 LINC00299Q6ZSB3 139 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 ZCCHC23Q6ZST2 131 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 ADGRA1Q86SQ6 560 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 SNX32Q86XE0 403 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 SNX31Q8N9S9 440 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 PIWIL2Q8TC59 973 aaKnown RBP9.76□□□□□ -0.85
SIX4-202ENST00000554079 ZFP90Q8TF47 636 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 RAB2BQ8WUD1 216 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 LRTOMTQ8WZ04 291 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 SNX19Q92543 992 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 TRIM63Q969Q1 353 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 ATP6V1E2Q96A05 226 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 VMP1Q96GC9 406 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 METTL2AQ96IZ6 378 aaKnown RBP9.76□□□□□ -0.85
SIX4-202ENST00000554079 UHRF1Q96T88 793 aaPredicted RBP9.76□□□□□ -0.85
SIX4-202ENST00000554079 PLA2G12BQ9BX93 195 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 SLC4A5Q9BY07 1137 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 RAB34Q9BZG1 259 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 NARFLQ9H6Q4 476 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 GIMAP4Q9NUV9 329 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 SEPT10Q9P0V9 454 aa9.76□□□□□ -0.85
SIX4-202ENST00000554079 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 H3BUI4 141 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 NOP56O00567 594 aaKnown RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 LYPLA1O75608 230 aaPredicted RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 SERPINB2P05120 415 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 PLA2G4BP0C869 781 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 RFX1P22670 979 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 EEF1DP29692 281 aaKnown RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 RRM2P31350 389 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 MSX2P35548 267 aaPredicted RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 DPP6P42658 865 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 AP2S1P53680 142 aaPredicted RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 GBE1Q04446 702 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 AQP6Q13520 282 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 NEDD8Q15843 81 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 TEDDM1Q5T9Z0 273 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 C16orf89Q6UX73 402 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ARCQ7LC44 396 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 PIWIL3Q7Z3Z3 882 aaKnown RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 LACC1Q8IV20 430 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 MFSD2AQ8NA29 543 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ZSWIM2Q8NEG5 633 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 GIMAP5Q96F15 307 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ZNF560Q96MR9 790 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 GLT1D1Q96MS3 346 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 CDRT15Q96T59 188 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 MMP19Q99542 508 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 DHX33Q9H6R0 707 aaKnown RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 SMOXQ9NWM0 555 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 KCND2Q9NZV8 630 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 MAD2L2Q9UI95 211 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ZNF229Q9UJW7 825 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 NOCTQ9UK39 431 aaKnown RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 DNPEPQ9ULA0 475 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 VANGL2Q9ULK5 521 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 KDM3AQ9Y4C1 1321 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 A0A0G2JMP0 313 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 SMCO2A6NFE2 343 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 GOLGA8SH3BPF8 625 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 GPR25O00155 361 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 SOCS2O14508 198 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 SLITRK3O94933 977 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 PDE8BO95263 885 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 TDP2O95551 362 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 BMP4P12644 408 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ICAM2P13598 275 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 CD1EP15812 388 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 FGFR2P21802 821 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 POLR2IP36954 125 aaKnown RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 OR3A3P47888 321 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 NUDT2P50583 147 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 GPLD1P80108 840 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 EVX2Q03828 476 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 ANO4Q32M45 955 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 FAM47AQ5JRC9 791 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 CCNJQ5T5M9 372 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 RSBN1Q5VWQ0 802 aaPredicted RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 GTF2IRD2BQ6EKJ0 949 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 DRICH1Q6PGQ1 229 aaPredicted RBP9.75□□□□□ -0.85
SIX4-202ENST00000554079 FKBP9P1Q75LS8 142 aa9.75□□□□□ -0.85
SIX4-202ENST00000554079 GTF2IRD2Q86UP8 949 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms