RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 APOEP02649 317 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 FGBP02675 491 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 CAPN2P17655 700 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 NUMBP49757 651 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 PPP2R2AP63151 447 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 RAB33AQ14088 237 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 NADSYN1Q6IA69 706 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 C4orf22Q6V702 233 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 CIR1Q86X95 450 aaPredicted RBP20.21■□□□□ 0.83
SSH1-209ENST00000551165 PALM2Q8IXS6 379 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 FBF1Q8TES7 1133 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 USP33Q8TEY7 942 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 PHACTR1Q9C0D0 580 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 NOL6Q9H6R4 1146 aaKnown RBP20.21■□□□□ 0.83
SSH1-209ENST00000551165 OLA1Q9NTK5 396 aaKnown RBP20.21■□□□□ 0.83
SSH1-209ENST00000551165 SLC12A6Q9UHW9 1150 aa20.21■□□□□ 0.83
SSH1-209ENST00000551165 NCAM2O15394 837 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 TPSB2P20231 275 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 MX2P20592 715 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 CA8P35219 290 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 TWF1Q12792 350 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 PLD1Q13393 1074 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 TPSAB1Q15661 275 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 FBXL22Q6P050 247 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 ATP11CQ8NB49 1132 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 RABEP2Q9H5N1 569 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 LCHNA4D1U4 455 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 LILRB3O75022 631 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 STK10O94804 968 aaKnown RBP20.2■□□□□ 0.82
SSH1-209ENST00000551165 AGTP01019 485 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 JCHAINP01591 159 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 SLC2A3P11169 496 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 SYN1P17600 705 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 MAGEA3P43357 314 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 GNGT1P63211 74 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 TPGS2Q68CL5 300 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 NLRP14Q86W24 1093 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 RTL3Q8N8U3 475 aaKnown RBP20.2■□□□□ 0.82
SSH1-209ENST00000551165 MCUQ8NE86 351 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 CFAP36Q96G28 342 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 BTN2A3PQ96KV6 586 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 CATSPERBQ9H7T0 1116 aa20.2■□□□□ 0.82
SSH1-209ENST00000551165 MRPL17Q9NRX2 175 aaKnown RBP20.2■□□□□ 0.82
SSH1-209ENST00000551165 NYNRINQ9P2P1 1898 aaKnown RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 PRRG1O14668 218 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 FGF10O15520 208 aaPredicted RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 COCHO43405 550 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 CRADDP78560 199 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 HTRA4P83105 476 aaPredicted RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 NRG1Q02297 640 aaPredicted RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 PARP6Q2NL67 630 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 CNTD1Q8N815 330 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 SIGLEC10Q96LC7 697 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 MCOLN1Q9GZU1 580 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 RNF38Q9H0F5 515 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 CDH23Q9H251 3354 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 C2orf78A6NCI8 922 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 SHOX2O60902 331 aaPredicted RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 FDFT1P37268 417 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 ALDH1A3P47895 512 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 TMEM240Q5SV17 173 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 PPP1R21Q6ZMI0 780 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 ATP6V0D2Q8N8Y2 350 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 KLHL23Q8NBE8 558 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 ARHGEF2Q92974 986 aaKnown RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 XPO6Q96QU8 1125 aaKnown RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 PRMT1Q99873 361 aaKnown RBP20.19■□□□□ 0.82
SSH1-209ENST00000551165 ZBED2Q9BTP6 218 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 GKN1Q9NS71 199 aa20.19■□□□□ 0.82
SSH1-209ENST00000551165 MAFKO60675 156 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 USP12O75317 370 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 CNPP09543 421 aaKnown RBP20.18■□□□□ 0.82
SSH1-209ENST00000551165 FPGSQ05932 587 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 TEX44Q53QW1 395 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 SPRED2Q7Z698 418 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 PRPF39Q86UA1 669 aaKnown RBP20.18■□□□□ 0.82
SSH1-209ENST00000551165 FIBCD1Q8N539 461 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 CCDC77Q9BR77 488 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 UBP1Q9NZI7 540 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 IGSF9Q9P2J2 1179 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 PCDHB12Q9Y5F1 795 aa20.18■□□□□ 0.82
SSH1-209ENST00000551165 RANBP2P49792 3224 aaKnown RBP20.18■□□□□ 0.82
SSH1-209ENST00000551165 NFKB1P19838 968 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 ATP5C1P36542 298 aaKnown RBP20.17■□□□□ 0.82
SSH1-209ENST00000551165 MDH1P40925 334 aaKnown RBP20.17■□□□□ 0.82
SSH1-209ENST00000551165 PAPOLAP51003 745 aaKnown RBP20.17■□□□□ 0.82
SSH1-209ENST00000551165 TMED2Q15363 201 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 AFMIDQ63HM1 303 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 OTOP3Q7RTS5 596 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 DNAJB7Q7Z6W7 309 aaPredicted RBP20.17■□□□□ 0.82
SSH1-209ENST00000551165 CROCCP2Q86T23 111 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 MAML1Q92585 1016 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 WBP2Q969T9 261 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 SELENOSQ9BQE4 189 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 FERMT1Q9BQL6 677 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 LGALS13Q9UHV8 139 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 DOCK4Q8N1I0 1966 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 TCRBV9S1A1TA0A576 114 aa20.17■□□□□ 0.82
SSH1-209ENST00000551165 CDH16O75309 829 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms