RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 PSTKQ8IV42 348 aaKnown RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 SUGP1Q8IWZ8 645 aaKnown RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 ARHGAP18Q8N392 663 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 EFCAB3Q8N7B9 438 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 PCDH19Q8TAB3 1148 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 TJP1Q07157 1748 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 LAMA4Q16363 1823 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 LYPLA1O75608 230 aaPredicted RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 F7P08709 466 aaPredicted RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 RAB27AP51159 221 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 CNGA3Q16281 694 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 PDK4Q16654 411 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 CAPRIN2Q6IMN6 1127 aaKnown RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 ISLR2Q6UXK2 745 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 DDX53Q86TM3 631 aaKnown RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 SCUBE1Q8IWY4 988 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 HS6ST3Q8IZP7 471 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 ARRDC4Q8NCT1 418 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 LPCAT1Q8NF37 534 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 CERS2Q96G23 380 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 SDCBP2Q9H190 292 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 SIX4Q9UIU6 781 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 TCRBV7S3A2A0A539 114 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 TSPAN8P19075 237 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 CD151P48509 253 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 RENBPP51606 427 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 POLD3Q15054 466 aaPredicted RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 DEFB107AQ8IZN7 70 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 ERLEC1Q96DZ1 483 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 KCTD15Q96SI1 283 aaPredicted RBP15.32■□□□□ 0.04
CUX1-214ENST00000550008 NDNQ99608 321 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 CDHR5Q9HBB8 845 aa15.32■□□□□ 0.04
CUX1-214ENST00000550008 CACNA1SQ13698 1873 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 XPO1O14980 1071 aaKnown RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 TRIM13O60858 407 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 ABHD2P08910 425 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 CALB2P22676 271 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 SP100P23497 879 aaPredicted RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 SLC25A52Q3SY17 297 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 TCHHL1Q5QJ38 904 aaPredicted RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 ZNF618Q5T7W0 954 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 CCDC138Q96M89 665 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 SERPINB11Q96P15 392 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 TLR8Q9NR97 1041 aaKnown RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 TMPRSS4Q9NRS4 437 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 TRIM17Q9Y577 477 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 SERPINE1P05121 402 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 PYGLP06737 847 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 CCNB1P14635 433 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 SOWAHAQ2M3V2 549 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 PDPK2PQ6A1A2 396 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 FCRL2Q96LA5 508 aaPredicted RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 RHOBTB2Q9BYZ6 727 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 ATP13A1Q9HD20 1204 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 CRLS1Q9UJA2 301 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 CDH9Q9ULB4 789 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 ARHGAP26Q9UNA1 814 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 ASGR1P07306 291 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 ELF3P78545 371 aaPredicted RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 FLOT2Q14254 428 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 NPLOC4Q8TAT6 608 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 FNIP1Q8TF40 1166 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 PIK3R5Q8WYR1 880 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 SNX19Q92543 992 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 MARK4Q96L34 752 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 UBE2OQ9C0C9 1292 aaKnown RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 NMRAL1Q9HBL8 299 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 THAP1Q9NVV9 213 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 DLGAP2Q9P1A6 1054 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 HACD1B0YJ81 288 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 AKAP10O43572 662 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 FSBPO95073 299 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 SERPINF2P08697 491 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 BTKQ06187 659 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 BFSP2Q13515 415 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 EME1Q96AY2 570 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 DDX50Q9BQ39 737 aaKnown RBP15.31■□□□□ 0.04
CUX1-214ENST00000550008 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 CASS4Q9NQ75 786 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 FAM50BQ9Y247 325 aa15.31■□□□□ 0.04
CUX1-214ENST00000550008 PIGRP01833 764 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 GRK2P25098 689 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 CD86P42081 329 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 TRMT10BQ6PF06 316 aaKnown RBP15.3■□□□□ 0.04
CUX1-214ENST00000550008 OTOP3Q7RTS5 596 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 CNPY4Q8N129 248 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 LRRC39Q96DD0 335 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 PCED1BQ96HM7 432 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 PIWIL1Q96J94 861 aaKnown RBP15.3■□□□□ 0.04
CUX1-214ENST00000550008 TSC22D3Q99576 134 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 TCF7L2Q9NQB0 619 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 NWD2Q9ULI1 1742 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 YJEFN3A6XGL0 299 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 E7ENQ6 273 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 TRIM16O95361 564 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 ZCCHC18P0CG32 403 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 CNTFP26441 200 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 GRIA1P42261 906 aa15.3■□□□□ 0.04
CUX1-214ENST00000550008 KLC1Q07866 573 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms