RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 TBC1D30Q9Y2I9 924 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 CREB3O43889 395 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 LTFP02788 710 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 MX2P20592 715 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 ARL4AP40617 200 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 RPS6KA3P51812 740 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 ATXN3P54252 364 aaPredicted RBP14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 MTTPP55157 894 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 EPGNQ6UW88 154 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 STRA8Q7Z7C7 330 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 KBTBD6Q86V97 674 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 ZNF567Q8N184 647 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 JADE3Q92613 823 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 OCEL1Q9H607 264 aa14.48□□□□□ -0.09
RAPGEF3-218ENST00000548919 CENPFP49454 3210 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 AMHP03971 560 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 POLBP06746 335 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 CHRNGP07510 517 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 LMO2P25791 158 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 GP5P40197 560 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 NUDT2P50583 147 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 FSTL4Q6MZW2 842 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 CDH19Q9H159 772 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 VCX3BQ9H321 246 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 GINS2Q9Y248 185 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 SSX2IPQ9Y2D8 614 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 PCDHB12Q9Y5F1 795 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 KLHL33A6NCF5 533 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 ZNF487B1APH4 448 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 G3V2L1 256 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 GOLGA8TH3BQL2 631 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 TSPAN1O60635 241 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 TLR1Q15399 786 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 FAM187BQ17R55 369 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 SH3D19Q5HYK7 790 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 SLC26A9Q7LBE3 791 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 ARHGAP18Q8N392 663 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 RNF148Q8N7C7 305 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 ICA1LQ8NDH6 482 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 ZNF669Q96BR6 464 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 NFKBIZQ9BYH8 718 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 MAF1Q9H063 256 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 PRDM12Q9H4Q4 367 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 TXNRD2Q9NNW7 524 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 CLIC5Q9NZA1 410 aa14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 PPP1R1BQ9UD71 204 aaPredicted RBP14.47□□□□□ -0.09
RAPGEF3-218ENST00000548919 CCDC78A2IDD5 438 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 MPSTP25325 297 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ALDH1A3P47895 512 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 GRM2Q14416 872 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 DALRD3Q5D0E6 543 aaKnown RBP14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ZNF618Q5T7W0 954 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 UGT2A3Q6UWM9 527 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 PID1Q7Z2X4 250 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 TDRD5Q8NAT2 981 aaKnown RBP14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 NCSTNQ92542 709 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 FAM149B1Q96BN6 582 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 NMD3Q96D46 503 aaKnown RBP14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ERAP1Q9NZ08 941 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 A0A096LPK6 155 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 C15orf38-AP3S2A0A0A6YYH1 394 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 USP2O75604 605 aaPredicted RBP14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ZNF286BP0CG31 522 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 MYL4P12829 197 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 CHN2P52757 468 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ITGA7Q13683 1181 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 LAMB3Q13751 1172 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 INSCQ1MX18 579 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 Q3C1V9 767 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ANKRD20A4Q4UJ75 823 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 HSP90AA5PQ58FG0 334 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 TMC7Q7Z402 723 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 ARPINQ7Z6K5 226 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 NAT14Q8WUY8 206 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 NDNQ99608 321 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 RBBP8Q99708 897 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 SNTG2Q9NY99 539 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 GJD2Q9UKL4 321 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 DTNAQ9Y4J8 743 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 CDY2AQ9Y6F7 541 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 CDY1Q9Y6F8 540 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 PAPPA2Q9BXP8 1791 aa14.46□□□□□ -0.09
RAPGEF3-218ENST00000548919 SAT1P21673 171 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 EPHA3P29320 983 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SULT1E1P49888 294 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 IFRD2Q12894 506 aaPredicted RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 GK3PQ14409 553 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 FSCBQ5H9T9 825 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SMYD5Q6GMV2 418 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 SNX32Q86XE0 403 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 APOBEC3FQ8IUX4 373 aaKnown RBP14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 DEFB106AQ8N104 65 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 MFSD3Q96ES6 412 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 MARK4Q96L34 752 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 EPAS1Q99814 870 aa14.45□□□□□ -0.1
RAPGEF3-218ENST00000548919 CPNE1Q99829 537 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms