RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 FGFR1OPO95684 399 aaKnown RBP14.61□□□□□ -0.07
PTCH1-217ENST00000548420 ABL1P00519 1130 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 IGHV4-34P06331 123 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 TBR1Q16650 682 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 CCDC40Q4G0X9 1142 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 RBM43Q6ZSC3 357 aaKnown RBP14.61□□□□□ -0.07
PTCH1-217ENST00000548420 FAM35AQ86V20 835 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 IRF2BP1Q8IU81 584 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 C12orf29Q8N999 325 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 KCNK16Q96T55 309 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 ACE2Q9BYF1 805 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-217ENST00000548420 EHD2Q9NZN4 543 aa14.61□□□□□ -0.07
PTCH1-217ENST00000548420 THAP10Q9P2Z0 257 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-217ENST00000548420 DNHD1Q96M86 4753 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 LRRK1Q38SD2 2015 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 FAM92AA1XBS5 289 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 NEDD8-MDP1E9PL57 170 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 OPA1O60313 960 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 GREM1O60565 184 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 SEMA4FO95754 770 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 RNF224P0DH78 156 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 ACADMP11310 421 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 SFTPCP11686 197 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 TYRP14679 529 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 ACO1P21399 889 aaKnown RBP14.6□□□□□ -0.07
PTCH1-217ENST00000548420 ANXA13P27216 316 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 PPP3CCP48454 512 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 RACK1P63244 317 aaKnown RBP14.6□□□□□ -0.07
PTCH1-217ENST00000548420 C3orf38Q5JPI3 329 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 CT47A1Q5JQC4 288 aaPredicted RBP14.6□□□□□ -0.07
PTCH1-217ENST00000548420 USP53Q70EK8 1073 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 TICAM1Q8IUC6 712 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 NUP93Q8N1F7 819 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 UBR7Q8N806 425 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 ZMIZ2Q8NF64 920 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 SLC2A14Q8TDB8 520 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 SGF29Q96ES7 293 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 SMARCD1Q96GM5 515 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 SMOQ99835 787 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 CISHQ9NSE2 258 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 COMMD8Q9NX08 183 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 PLAAQ9Y263 795 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 ATP8B3O60423 1300 aa14.6□□□□□ -0.07
PTCH1-217ENST00000548420 A0A1W2PR77 199 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 SIGLEC6O43699 453 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 BEST1O76090 585 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 CCDC130P13994 396 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 PRKCHP24723 683 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 COL8A1P27658 744 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 ERCC5P28715 1186 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-217ENST00000548420 RAD23BP54727 409 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 CUL2Q13617 745 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 DPCR1Q3MIW9 517 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 SGO2Q562F6 1265 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 DDX42Q86XP3 938 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCH1-217ENST00000548420 SLC4A11Q8NBS3 891 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 ZNF564Q8TBZ8 553 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-217ENST00000548420 CYFIP2Q96F07 1278 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 DEPDC7Q96QD5 511 aa14.59□□□□□ -0.07
PTCH1-217ENST00000548420 DMAP1Q9NPF5 467 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-217ENST00000548420 GEMIN8Q9NWZ8 242 aaKnown RBP14.59□□□□□ -0.07
PTCH1-217ENST00000548420 ATXN7L1Q9ULK2 861 aaPredicted RBP14.59□□□□□ -0.07
PTCH1-217ENST00000548420 ADGRG4Q8IZF6 3080 aa14.58□□□□□ -0.07
PTCH1-217ENST00000548420 HHLA1C9JL84 531 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 COCHO43405 550 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 NOBOXO60393 691 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 AP1G2O75843 785 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 CLSTN1O94985 981 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 RTN3O95197 1032 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-217ENST00000548420 CD58P19256 250 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 DGKGP49619 791 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 TAF10Q12962 218 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 NCAPHQ15003 741 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 SNX30Q5VWJ9 437 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 TPGS1Q6ZTW0 290 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCH1-217ENST00000548420 EHBP1Q8NDI1 1231 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 OVCA2Q8WZ82 227 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 CCDC97Q96F63 343 aaPredicted RBP14.58□□□□□ -0.08
PTCH1-217ENST00000548420 MED10Q9BTT4 135 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 BBS2Q9BXC9 721 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 FAM49BQ9NUQ9 324 aa14.58□□□□□ -0.08
PTCH1-217ENST00000548420 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.58□□□□□ -0.08
PTCH1-217ENST00000548420 CELSR1Q9NYQ6 3014 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 GOLGA6L22H0YM25 854 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 ZDHHC11BP0C7U3 371 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 C7P10643 843 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 TRIM21P19474 475 aaKnown RBP14.57□□□□□ -0.08
PTCH1-217ENST00000548420 TBXAS1P24557 533 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-217ENST00000548420 YWHAQP27348 245 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 RBMS1P29558 406 aaKnown RBP14.57□□□□□ -0.08
PTCH1-217ENST00000548420 CASRP41180 1078 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 RXRGP48443 463 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 ZNF132P52740 706 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 INHBCP55103 352 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 CETN1Q12798 172 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 TGIF1Q15583 401 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 GEN1Q17RS7 908 aa14.57□□□□□ -0.08
PTCH1-217ENST00000548420 PPP1R26Q5T8A7 1209 aaPredicted RBP14.57□□□□□ -0.08
PTCH1-217ENST00000548420 ARHGAP17Q68EM7 881 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms