RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 KNDC1Q76NI1 1749 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 CASTOR2A6NHX0 329 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 H3BMM5 538 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 PSMG1O95456 288 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 CCT8P50990 548 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 NR6A1Q15406 480 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 TATDN1Q6P1N9 297 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 OOSP2Q86WS3 158 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 SVOPQ8N4V2 548 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 ZCCHC18P0CG32 403 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 YWHAQP27348 245 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 PPIL2Q13356 520 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 PGS1Q32NB8 556 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 ZACNQ401N2 412 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 CCDC81Q6ZN84 652 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 OR6Y1Q8NGX8 325 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 REPS1Q96D71 796 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 CELF6Q96J87 481 aaKnown RBP12.77□□□□□ -0.37
COL4A6-209ENST00000545689 ZFYVE19Q96K21 471 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 RNF157Q96PX1 679 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 DPP7Q9UHL4 492 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 TMEM150BA6NC51 233 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 DCDC2CA8MYV0 355 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 SPATA31C2B4DYI2 1134 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 RAG1P15918 1043 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 SETD9Q8NE22 299 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 LPCAT1Q8NF37 534 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 RMND5BQ96G75 393 aaPredicted RBP12.77□□□□□ -0.37
COL4A6-209ENST00000545689 FAM124BQ9H5Z6 455 aaPredicted RBP12.77□□□□□ -0.37
COL4A6-209ENST00000545689 UXTQ9UBK9 157 aaPredicted RBP12.77□□□□□ -0.37
COL4A6-209ENST00000545689 DERAQ9Y315 318 aa12.77□□□□□ -0.37
COL4A6-209ENST00000545689 MANSC4A6NHS7 340 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 SNHG28P0DPA3 235 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ATP6V1B2P21281 511 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ADORA2AP29274 412 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 SOX11P35716 441 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 CDH8P55286 799 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TMC7Q7Z402 723 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ZNF557Q8N988 423 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 POP5Q969H6 163 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 POMKQ9H5K3 350 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TNPO3Q9Y5L0 923 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 KRT87PA6NCN2 255 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 MSH3P20585 1137 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TGM3Q08188 693 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TLK2Q86UE8 772 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 EDEM1Q92611 657 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ACSS3Q9H6R3 686 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ACTR8Q9H981 624 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 RNPEPL1Q9HAU8 725 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 AHSPQ9NZD4 102 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 COPG2Q9UBF2 871 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 VAV3Q9UKW4 847 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 NRCAMQ92823 1304 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 CCDC154A6NI56 674 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 CBX4O00257 560 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TPP1O14773 563 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 SHBGP04278 402 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 DRD4P21917 467 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 FAM183BPQ6ZVS7 135 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 PIWIL2Q8TC59 973 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 KAT5Q92993 513 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 LENG9Q96B70 501 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 UBP1Q9NZI7 540 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 LNPEPQ9UIQ6 1025 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 EFR3BQ9Y2G0 817 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 RPL22P35268 128 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TMEM139Q8IV31 216 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ZNF184Q99676 751 aaPredicted RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 MID1IP1Q9NPA3 183 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 MAPRE3Q9UPY8 281 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 REXO2Q9Y3B8 237 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 RASSF9O75901 435 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 BAIAP3O94812 1187 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 VAPBO95292 243 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 LDLRP01130 860 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 OR1E1P30953 314 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ACVR2BQ13705 512 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TMEM26Q6ZUK4 368 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 EID3Q8N140 333 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 ACTRT2Q8TDY3 377 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 MRPL48Q96GC5 212 aaKnown RBP12.76□□□□□ -0.37
COL4A6-209ENST00000545689 TMEM237Q96Q45 408 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 PANX3Q96QZ0 392 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 RAD21L1Q9H4I0 556 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 CDHR5Q9HBB8 845 aa12.76□□□□□ -0.37
COL4A6-209ENST00000545689 A0A0B4J269 797 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 TISP43B9A030 160 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 AKAP5P24588 427 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 ARL4DP49703 201 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 SCNN1BP51168 640 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 CLCN5P51795 746 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 EPS8Q12929 822 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 FAM45BPQ6NSW5 357 aa12.75□□□□□ -0.37
COL4A6-209ENST00000545689 POLR1EQ9GZS1 481 aaKnown RBP12.75□□□□□ -0.37
COL4A6-209ENST00000545689 LHX5Q9H2C1 402 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms