RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 NPY2RP49146 381 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CD83Q01151 205 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 NR6A1Q15406 480 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 HIST2H2ACQ16777 129 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 HIST2H2AA3Q6FI13 130 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PRR5LQ6MZQ0 368 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 KLHDC10Q6PID8 442 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PTAR1Q7Z6K3 402 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 PIK3R3Q92569 461 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 AP1S3Q96PC3 154 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ERGIC2Q96RQ1 377 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 ZNF350Q9GZX5 532 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 POLR3FQ9H1D9 316 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 CATSPERZQ9NTU4 200 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CAPN8A6NHC0 703 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 KPNA3O00505 521 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 TP73O15350 636 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 GNAO1P09471 354 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 CYP2C8P10632 490 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 FGFR2P21802 821 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 TNFRSF8P28908 595 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 SDC2P34741 201 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PTPN5P54829 565 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 SEMA3AQ14563 771 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 HERC3Q15034 1050 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 USP17L6PQ6QN14 398 aa8.79□□□□□ -1
ATXN3-216ENST00000545170 PNPT1Q8TCS8 783 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 ZNF717Q9BY31 904 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 FAM49AQ9H0Q0 323 aaPredicted RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 AGO2Q9UKV8 859 aaKnown RBP8.79□□□□□ -1
ATXN3-216ENST00000545170 KCNQ3O43525 872 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 ITGA4P13612 1032 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 MSR1P21757 451 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 CCNA1P78396 465 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 SCN1BQ07699 218 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 FRG1Q14331 258 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 TFDP3Q5H9I0 405 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 NIPAL1Q6NVV3 410 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 C3orf18Q9UK00 162 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 CLEC4AQ9UMR7 237 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 A0A087X0T9 212 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 MGAT4DA6NG13 374 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PDE8BO95263 885 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 GDF11O95390 407 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PCNAP12004 261 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 GUCY1A2P33402 732 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 CCNG1P51959 295 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 NPEPPSP55786 919 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 RFX4Q33E94 735 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.78□□□□□ -1
ATXN3-216ENST00000545170 TRAPPC3LQ5T215 181 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 DUS1LQ6P1R4 473 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 ZNF677Q86XU0 584 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 GSTCDQ8NEC7 633 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PFDN5Q99471 154 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 SLC25A23Q9BV35 468 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 GNEQ9Y223 722 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 ABCB11O95342 1321 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 KCNH1O95259 989 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 RPN2P04844 631 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 RBP1P09455 135 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PIK3CGP48736 1102 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 LACTB2Q53H82 288 aaPredicted RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 PPM1LQ5SGD2 360 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 BTBD8Q5XKL5 378 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 MB21D2Q8IYB1 491 aaPredicted RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 CDK20Q8IZL9 346 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 EIF1ADQ8N9N8 165 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 SPAG4Q9NPE6 437 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 G3V2T6 193 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 CASKO14936 926 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 CST1P01037 141 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 STIP1P31948 543 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 HKDC1Q2TB90 917 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 OGFOD2Q6N063 350 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 KIAA1841Q6NSI8 718 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 HAGHLQ6PII5 290 aaPredicted RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 CCNJLQ8IV13 435 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 MCPH1Q8NEM0 835 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 EXD1Q8NHP7 514 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 FAM136AQ96C01 138 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PABPC5Q96DU9 382 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 DIRAS2Q96HU8 199 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 Q96MT0 163 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 A0A0B4J269 797 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 RPL6Q02878 288 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 TUBB3Q13509 450 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 SNAP47Q5SQN1 464 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 GRTP1Q5TC63 336 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 CXXC5Q7LFL8 322 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 PQLC1Q8N2U9 271 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 FAM13CQ8NE31 585 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 SLC9A6Q92581 669 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 KAT2BQ92831 832 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 PTCD3Q96EY7 689 aaKnown RBP8.78□□□□□ -1
ATXN3-216ENST00000545170 SLC7A5P2Q9GIP4 190 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 POMKQ9H5K3 350 aa8.78□□□□□ -1
ATXN3-216ENST00000545170 SLC5A4Q9NY91 659 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms