RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 CMTM6Q9NX76 183 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 AKAP3O75969 853 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 AKAP5P24588 427 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 TTI2Q6NXR4 508 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 SYT12Q8IV01 421 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 HERC6Q8IVU3 1022 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 CDHR5Q9HBB8 845 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 AHSPQ9NZD4 102 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 CCL15-CCL14A0A0B4J2E2 113 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 GJB6O95452 261 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 CXCL8P10145 99 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 DBTP11182 482 aaKnown RBP15.73■□□□□ 0.11
CHD4-210ENST00000544040 GP5P40197 560 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 NAMPTP43490 491 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 CCL15Q16663 113 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 RGS21Q2M5E4 152 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 MARC1Q5VT66 337 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 R3HCC1LQ7Z5L2 792 aaKnown RBP15.73■□□□□ 0.11
CHD4-210ENST00000544040 TMEM169Q96HH4 297 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 MTIF3Q9H2K0 278 aaKnown RBP15.73■□□□□ 0.11
CHD4-210ENST00000544040 ARHGAP28Q9P2N2 729 aa15.73■□□□□ 0.11
CHD4-210ENST00000544040 A0A0A6YYK5 440 aaPredicted RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 CCDC182A6NF36 153 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 CKBP12277 381 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 COX7A2P14406 83 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 SPANXN3Q5MJ09 141 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 MZT2BQ6NZ67 158 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 ZFP1Q6P2D0 407 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 POC5Q8NA72 575 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 CHST13Q8NET6 341 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 MTMR8Q96EF0 704 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 SF3B1O75533 1304 aaKnown RBP eCLIP15.72■□□□□ 0.114e-6■■■■■ 83.2
CHD4-210ENST00000544040 TPP1O14773 563 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 PGM3O95394 542 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 SLC25A27O95847 323 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 TAL1P17542 331 aaPredicted RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 TYMPP19971 482 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 ACAT1P24752 427 aaKnown RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 RALGDSQ12967 914 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 NANOGNBQ7Z5D8 188 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 REEP1Q9H902 201 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 USP42Q9H9J4 1324 aaKnown RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 BIRC5O15392 142 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 ADRA1DP25100 572 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 CRABP2P29373 138 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 NEK3P51956 506 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 CHN2P52757 468 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 SLC25A3Q00325 362 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 MCL1Q07820 350 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 CDH17Q12864 832 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 TOMM20Q15388 145 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 IRGCQ6NXR0 463 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 NMRAL1Q9HBL8 299 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 ACADMP11310 421 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 BST2Q10589 180 aaKnown RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 TMC7Q7Z402 723 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 WDR60Q8WVS4 1066 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 TMEM159Q96B96 161 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 KHDRBS3O75525 346 aaKnown RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 KCNH1O95259 989 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 PTPN11Q06124 597 aaPredicted RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 ADIGQ0VDE8 80 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 PTPAQ15257 358 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 FBXO16Q8IX29 292 aaPredicted RBP15.72■□□□□ 0.11
CHD4-210ENST00000544040 UCMAQ8WVF2 138 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 ETAA1Q9NY74 926 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 TRPM5Q9NZQ8 1165 aa15.72■□□□□ 0.11
CHD4-210ENST00000544040 USP12O75317 370 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 EGFRP00533 1210 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ADSLP30566 484 aaPredicted RBP15.71■□□□□ 0.11
CHD4-210ENST00000544040 PRKAG1P54619 331 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.11
CHD4-210ENST00000544040 ZNF518BQ9C0D4 1074 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 MAGEB16A2A368 324 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 GPR182O15218 404 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ENTPD3O75355 529 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 MICAL2O94851 1124 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 EPN2O95208 641 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 S100A3P33764 101 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 DCTN2Q13561 401 aaKnown RBP15.71■□□□□ 0.11
CHD4-210ENST00000544040 ACOX1Q15067 660 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 MZT2AQ6P582 158 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 MCOLN2Q8IZK6 566 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 HTR3CQ8WXA8 447 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ZKSCAN4Q969J2 545 aaPredicted RBP15.71■□□□□ 0.11
CHD4-210ENST00000544040 C17orf75Q9HAS0 396 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 DDX43Q9NXZ2 648 aaKnown RBP15.71■□□□□ 0.11
CHD4-210ENST00000544040 MOXD2PA6NHM9 499 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 TP73O15350 636 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ADCY6O43306 1168 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 RGS14O43566 566 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ANXA6P08133 673 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 MYL4P12829 197 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ADRA2BP18089 450 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 HPCAL1P37235 193 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 FNIP1Q8TF40 1166 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 ANAPC2Q9UJX6 822 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 DNPEPQ9ULA0 475 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 RARAP10276 462 aa15.71■□□□□ 0.11
CHD4-210ENST00000544040 GZMAP12544 262 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms