RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 CEP41Q9BYV8 373 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 SDCBP2Q9H190 292 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 PLEKHA4Q9H4M7 779 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 CYP4F11Q9HBI6 524 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 UBE2TQ9NPD8 197 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-217ENST00000543205 CISHQ9NSE2 258 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 GPRC5BQ9NZH0 403 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 AFF4Q9UHB7 1163 aaKnown RBP5.37□□□□□ -1.55
CLIP1-217ENST00000543205 GTF3C4Q9UKN8 822 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 BARX2Q9UMQ3 279 aaPredicted RBP5.37□□□□□ -1.55
CLIP1-217ENST00000543205 COG5Q9UP83 839 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 SCN1AP35498 2009 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 MYO9BQ13459 2157 aa5.37□□□□□ -1.55
CLIP1-217ENST00000543205 LGALS16A8MUM7 142 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 C1QTNF9BB2RNN3 333 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 B9A039 149 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PRODHO43272 600 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SART1O43290 800 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 HCRTO43612 131 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ATP2C2O75185 946 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TMEM127O75204 238 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CNOT4O95628 575 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PABPC1P11940 636 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 HOXB8P17481 243 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 HOXD12P35452 270 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 IGFALSP35858 605 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CDR1P51861 262 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SUMO1P63165 101 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CYP27A1Q02318 531 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 GCNT1Q02742 428 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 INCA1Q0VD86 236 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 UVSSAQ2YD98 709 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MDH1BQ5I0G3 518 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PPM1LQ5SGD2 360 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FAAH2Q6GMR7 532 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ZCCHC8Q6NZY4 707 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 LILRA6Q6PI73 481 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CYP26C1Q6V0L0 522 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 C4orf50Q6ZRC1 276 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ENOSF1Q7L5Y1 443 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ACOT1Q86TX2 421 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CD163Q86VB7 1156 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ARHGEF19Q8IW93 802 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 B3GALNT2Q8NCR0 500 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 VN1R2Q8NFZ6 395 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 AHCYL2Q96HN2 611 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 HEXIM2Q96MH2 286 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SEPT5Q99719 369 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MED10Q9BTT4 135 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 LSM14BQ9BX40 385 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 DPEP3Q9H4B8 488 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FAM124BQ9H5Z6 455 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 UBE2ZQ9H832 354 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SFXN1Q9H9B4 322 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 C14orf119Q9NWQ9 140 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 IFT80Q9P2H3 777 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 APEX2Q9UBZ4 518 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FBXW11Q9UKB1 542 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TMCC3Q9ULS5 477 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PCDHB4Q9Y5E5 795 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CHD9Q3L8U1 2897 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MUC6Q6W4X9 2439 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 LAMA2P24043 3122 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CCDC195A0A1B0GUA6 201 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TCRBV16S1A1N1A0A5B0 115 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MYBPHLA2RUH7 354 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MTMR11A4FU01 709 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PABPN1LA6NDY0 278 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 RASA4BC9J798 803 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 RASA4O43374 803 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PLOD3O60568 738 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FKBP9O95302 570 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SEC24AO95486 1093 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 GLP2RO95838 553 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 LRG1P02750 347 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TPM3P06753 285 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 C8AP07357 584 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ADH5P11766 374 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 KRT5P13647 590 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ABCB4P21439 1286 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 KCNA5P22460 613 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 USP8P40818 1118 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ALDH1A3P47895 512 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TUFMP49411 452 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 SCNN1BP51168 640 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 UBASH3AP57075 661 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 IL2P60568 153 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 DUSP4Q13115 394 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PLD1Q13393 1074 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 KCNC3Q14003 757 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 TERF2Q15554 542 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CLUL1Q15846 466 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 PDCD2Q16342 344 aaPredicted RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 MGAT5BQ3V5L5 792 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 RARS2Q5T160 578 aaKnown RBP5.36□□□□□ -1.55
CLIP1-217ENST00000543205 KLHDC7AQ5VTJ3 777 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 CES5AQ6NT32 575 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 FAM171BQ6P995 826 aa5.36□□□□□ -1.55
CLIP1-217ENST00000543205 ABHD17CQ6PCB6 329 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms