RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 ANLNQ9NQW6 1124 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 VPS13AQ96RL7 3174 aa13.81□□□□□ -0.2
CCDC130-202ENST00000540216 SPAG17Q6Q759 2223 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 PTPRZ1P23471 2315 aaPredicted RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 CKAP5Q14008 2032 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 DRGXA6NNA5 263 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 TMCO5BA8MYB1 307 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 I6L893 689 aaPredicted RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF217O75362 1048 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 RHOBTB1O94844 696 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 GJB6O95452 261 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 FTLP02792 175 aaPredicted RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 EPHX1P07099 455 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 RETP07949 1114 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 SRPRAP08240 638 aaKnown RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 TPM1P09493 284 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 NDUFV2P19404 249 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 PRKCHP24723 683 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 CASP14P31944 242 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 ADRA1BP35368 520 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 P2RY2P41231 377 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 CSKP41240 450 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 PLK1P53350 603 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 ST8SIA6P61647 398 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 NRG1Q02297 640 aaPredicted RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 SULT2A1Q06520 285 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 MAMLD1Q13495 774 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 ELF2Q15723 593 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 PTPRNQ16849 979 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 CDO1Q16878 200 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 CXorf57Q6NSI4 855 aaKnown RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 SARM1Q6SZW1 724 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 SETD3Q86TU7 594 aaPredicted RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 VSTM4Q8IW00 320 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 DRC7Q8IY82 874 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 FAM160A2Q8N612 972 aaPredicted RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 GPR161Q8N6U8 529 aaKnown RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 CYB5D2Q8WUJ1 264 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 NTAN1Q96AB6 310 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 MRGPRX1Q96LB2 322 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 HINFPQ9BQA5 517 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 ISCUQ9H1K1 167 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 RETREG1Q9H6L5 497 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 INTS6Q9UL03 887 aaKnown RBP13.8□□□□□ -0.2
CCDC130-202ENST00000540216 TBC1D30Q9Y2I9 924 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 RAD54BQ9Y620 910 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 SCINQ9Y6U3 715 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 PLXND1Q9Y4D7 1925 aa13.8□□□□□ -0.2
CCDC130-202ENST00000540216 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 E9PAM4 449 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 CCP110O43303 1012 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 LRP3O75074 770 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 GGCXP38435 758 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 AIF1P55008 147 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 HDAC4P56524 1084 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 RPL7AP62424 266 aaKnown RBP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 ECT2LQ008S8 904 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 SCAPQ12770 1279 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 ARID5BQ14865 1188 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 MAP7D1Q3KQU3 841 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 PLK5Q496M5 336 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 SH3PXD2AQ5TCZ1 1133 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 RNF219Q5W0B1 726 aaPredicted RBP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 C14orf80Q86SX3 495 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 METTL3Q86U44 580 aaKnown RBP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 KBTBD6Q86V97 674 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 CIR1Q86X95 450 aaPredicted RBP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 FNIP1Q8TF40 1166 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF653Q96CK0 615 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 DNAJC7Q99615 494 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 OSBPL2Q9H1P3 480 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 PPARGC1AQ9UBK2 798 aaKnown RBP13.79□□□□□ -0.2
CCDC130-202ENST00000540216 SUN2Q9UH99 717 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 ADAMTS1Q9UHI8 967 aa13.79□□□□□ -0.2
CCDC130-202ENST00000540216 C7P10643 843 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 VASPP50552 380 aaPredicted RBP13.78□□□□□ -0.2
CCDC130-202ENST00000540216 IRAK1P51617 712 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 LPAL2Q16609 132 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 C6orf118Q5T5N4 469 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 SLC36A4Q6YBV0 504 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 ZNF783Q6ZMS7 281 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 TMC6Q7Z403 805 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 SLFN11Q7Z7L1 901 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 OR8K1Q8NGG5 319 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 OR2T3Q8NH03 318 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 FEM1AQ9BSK4 669 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 ZYG11BQ9C0D3 744 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 MRPL47Q9HD33 250 aaKnown RBP13.78□□□□□ -0.2
CCDC130-202ENST00000540216 TMPRSS4Q9NRS4 437 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 ZNHIT6Q9NWK9 470 aaKnown RBP13.78□□□□□ -0.2
CCDC130-202ENST00000540216 CNOT8Q9UFF9 292 aaKnown RBP13.78□□□□□ -0.2
CCDC130-202ENST00000540216 OR12D3Q9UGF7 316 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 ERVW-1Q9UQF0 538 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 PCDHGA5Q9Y5G8 931 aa13.78□□□□□ -0.2
CCDC130-202ENST00000540216 TMEM191CA6NGB0 347 aa13.77□□□□□ -0.21
CCDC130-202ENST00000540216 DCLK1O15075 740 aa13.77□□□□□ -0.21
CCDC130-202ENST00000540216 ZNF292O60281 2723 aa13.77□□□□□ -0.21
CCDC130-202ENST00000540216 FOXD2O60548 495 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms