RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 CCDC33Q8N5R6 958 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 LZTR1Q8N653 840 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 RTL3Q8N8U3 475 aaKnown RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 RUBCNQ92622 972 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 USP13Q92995 863 aaPredicted RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 RETREG1Q9H6L5 497 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 TMEM248Q9NWD8 314 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 ZMYM5Q9UJ78 669 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 MRPS23Q9Y3D9 190 aaKnown RBP12.06□□□□□ -0.48
SPARC-207ENST00000537849 MTCH2Q9Y6C9 303 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 CLUHO75153 1309 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 DOCK8Q8NF50 2099 aa12.06□□□□□ -0.48
SPARC-207ENST00000537849 TMEM265A0A087WTH1 108 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 ESYT3A0FGR9 886 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 SPDYE4A6NLX3 237 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 F5H5T6 163 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 DYNC1I1O14576 645 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 TRDMT1O14717 391 aaKnown RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 TCF3P15923 654 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 H2AFXP16104 143 aaPredicted RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 TNFRSF8P28908 595 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 RPL22P35268 128 aaKnown RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 RPL21P46778 160 aaKnown RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 GDF10P55107 478 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 GALNT2Q10471 571 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 CBX2Q14781 532 aaPredicted RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 PDK1Q15118 436 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 PRKD1Q15139 912 aaPredicted RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 CTC1Q2NKJ3 1217 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 CFAP52Q8N1V2 620 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 FAM71DQ8N9W8 422 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 RIN3Q8TB24 985 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 SH3RF2Q8TEC5 729 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 ANKRD7Q92527 254 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 RTP4Q96DX8 246 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 P2RY11Q96G91 374 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 CCDC114Q96M63 670 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 RPRD1AQ96P16 312 aaPredicted RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 TSGA13Q96PP4 275 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 QKIQ96PU8 341 aaKnown RBP eCLIP12.05□□□□□ -0.48
SPARC-207ENST00000537849 LGMNQ99538 433 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 DDX50Q9BQ39 737 aaKnown RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 SLC39A8Q9C0K1 460 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 RAB17Q9H0T7 212 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 SMG9Q9H0W8 520 aaKnown RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 S1PR5Q9H228 398 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 TDP1Q9NUW8 608 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 CLEC1BQ9P126 229 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 CFAP97Q9P2B7 532 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 CCL26Q9Y258 94 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 ZNF510Q9Y2H8 683 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 SNX24Q9Y343 169 aa12.05□□□□□ -0.48
SPARC-207ENST00000537849 UTP11Q9Y3A2 253 aaKnown RBP12.05□□□□□ -0.48
SPARC-207ENST00000537849 NYNRINQ9P2P1 1898 aaKnown RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 E2F8A0AVK6 867 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 CFAP69A5D8W1 941 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 SGK1O00141 431 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 TP73O15350 636 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 NCAM2O15394 837 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 TSPAN3O60637 253 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 GAS8O95995 478 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 MYBL2P10244 700 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 VAV1P15498 845 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 HOXB8P17481 243 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 SERPINB6P35237 376 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 SGSHP51688 502 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 NDST2P52849 883 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 NRLP54845 237 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 RPS24P62847 133 aaKnown RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 COL19A1Q14993 1142 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 BRD3Q15059 726 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 PPP1R7Q15435 360 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 FAM182AQ5T1J6 154 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 GSTA5Q7RTV2 222 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 CDKL3Q8IVW4 592 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 ARID3BQ8IVW6 561 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 EIF1ADQ8N9N8 165 aaKnown RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 ZSCAN18Q8TBC5 510 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 TFB1MQ8WVM0 346 aaKnown RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 RSAD2Q8WXG1 361 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 ING5Q8WYH8 240 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 CELF6Q96J87 481 aaKnown RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 PRICKLE1Q96MT3 831 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 APOL5Q9BWW9 433 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 TRIM31Q9BZY9 425 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 BRD8Q9H0E9 1235 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 DPH5Q9H2P9 285 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 ADAM7Q9H2U9 754 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 FAM114A2Q9NRY5 505 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 GRHL1Q9NZI5 618 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 CDH22Q9UJ99 828 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 LSM7Q9UK45 103 aaKnown RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 ZFP37Q9Y6Q3 630 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 BRWD1Q9NSI6 2320 aa12.04□□□□□ -0.48
SPARC-207ENST00000537849 NUP210Q8TEM1 1887 aaPredicted RBP12.04□□□□□ -0.48
SPARC-207ENST00000537849 C5orf60A6NFR6 353 aa12.03□□□□□ -0.48
SPARC-207ENST00000537849 SOX1O00570 391 aaPredicted RBP12.03□□□□□ -0.48
SPARC-207ENST00000537849 SCAMP3O14828 347 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms