RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 DDX50Q9BQ39 737 aaKnown RBP18.39■□□□□ 0.53
SMG1-203ENST00000532700 NLRC4Q9NPP4 1024 aa18.39■□□□□ 0.53
SMG1-203ENST00000532700 FAM207AQ9NSI2 230 aaPredicted RBP18.39■□□□□ 0.53
SMG1-203ENST00000532700 ANO10Q9NW15 660 aa18.39■□□□□ 0.53
SMG1-203ENST00000532700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMG1-203ENST00000532700 VANGL2Q9ULK5 521 aa18.39■□□□□ 0.53
SMG1-203ENST00000532700 MEI4A8MW99 385 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 F5H5T6 163 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 CNTN5O94779 1100 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 GJB6O95452 261 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 ATP5BP06576 529 aaKnown RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 HOXD12P35452 270 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 POLR2FP61218 127 aaKnown RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 FAM193AP78312 1265 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 AUHQ13825 339 aaKnown RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 STX1AQ16623 288 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 KLHL40Q2TBA0 621 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 HNRNPA1L2Q32P51 320 aaKnown RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 C9orf64Q5T6V5 341 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 NAA35Q5VZE5 725 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 CAVIN1Q6NZI2 390 aaKnown RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 LAYNQ6UX15 382 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 PHLDB2Q86SQ0 1253 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 ZNF683Q8IZ20 524 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 MINDY1Q8N5J2 469 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 ATP6V0D2Q8N8Y2 350 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 DNASE2BQ8WZ79 361 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 NT5C3BQ969T7 300 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 TRIM62Q9BVG3 475 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 STK33Q9BYT3 514 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 RSPH9Q9H1X1 276 aaPredicted RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 IL21RQ9HBE5 538 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 TMEM63CQ9P1W3 806 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 EIF2B4Q9UI10 523 aaKnown RBP18.38■□□□□ 0.53
SMG1-203ENST00000532700 DOCK4Q8N1I0 1966 aa18.38■□□□□ 0.53
SMG1-203ENST00000532700 METTL12A8MUP2 240 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 GOLGA8SH3BPF8 625 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 ARHGAP33O14559 1287 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 GJB3O75712 270 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 ACADMP11310 421 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 CCR1P32246 355 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 NOS2P35228 1153 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 MATKP42679 507 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 SULT1E1P49888 294 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 COPB1P53618 953 aaKnown RBP18.37■□□□□ 0.53
SMG1-203ENST00000532700 FMO1Q01740 532 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 GFPT1Q06210 699 aaPredicted RBP18.37■□□□□ 0.53
SMG1-203ENST00000532700 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
SMG1-203ENST00000532700 ALFQ53S48 1182 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 FAM102AQ5T9C2 384 aaPredicted RBP18.37■□□□□ 0.53
SMG1-203ENST00000532700 DAB2IPQ5VWQ8 1189 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 PIP4P1Q86T03 277 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 TMEM35BQ8NCS4 154 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 NOX5Q96PH1 765 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 PCDHB18PQ96TA0 734 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 FAM129BQ96TA1 746 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 ORAI3Q9BRQ5 295 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 MIR1-1HGQ9H1L0 117 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 SYNCQ9H7C4 482 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 OR51B4Q9Y5P0 310 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 ITIH6Q6UXX5 1313 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 CACNA1EQ15878 2313 aa18.37■□□□□ 0.53
SMG1-203ENST00000532700 TYW5A2RUC4 315 aaKnown RBP18.36■□□□□ 0.53
SMG1-203ENST00000532700 PLK4O00444 970 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 CD59P13987 128 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 ZNF18P17022 549 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 SPINK2P20155 84 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 ABCB4P21439 1286 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 CXCR3P49682 368 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 ZNF252P-AS1Q0IIN9 211 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 GRIK2Q13002 908 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 SEMA3BQ13214 749 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 SYCP1Q15431 976 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 BNIPLQ7Z465 357 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 EMC1Q8N766 993 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 PTPRN2Q92932 1015 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 RNF34Q969K3 372 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 CFAP57Q96MR6 1250 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 CAMK1GQ96NX5 476 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 RPRD1AQ96P16 312 aaPredicted RBP18.36■□□□□ 0.53
SMG1-203ENST00000532700 NUP58Q9BVL2 599 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 MAGEB5Q9BZ81 275 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 SIK2Q9H0K1 926 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 ARHGEF38Q9NXL2 777 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.36■□□□□ 0.53
SMG1-203ENST00000532700 KIAA1522Q9P206 1035 aaPredicted RBP18.36■□□□□ 0.53
SMG1-203ENST00000532700 TMEM59LQ9UK28 342 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 WASF3Q9UPY6 502 aa18.36■□□□□ 0.53
SMG1-203ENST00000532700 A0A1B0GVM2 712 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 TCAF2A6NFQ2 919 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 MID1O15344 667 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 ASLP04424 464 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 ATP1A3P13637 1013 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 OXTRP30559 389 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 BPIFB4P59827 614 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 KCNT1Q5JUK3 1230 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 ZNF776Q68DI1 518 aaPredicted RBP18.35■□□□□ 0.53
SMG1-203ENST00000532700 ERICH1Q86X53 443 aa18.35■□□□□ 0.53
SMG1-203ENST00000532700 MMAAQ8IVH4 418 aaKnown RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms