RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 PPFIA2O75334 1257 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 VAPBO95292 243 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 PSMB4P28070 264 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 ASPAP45381 313 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 NOVP48745 357 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 GABPB1Q06547 395 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 EMID1Q96A84 441 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 SUSD3Q96L08 255 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 MCOLN1Q9GZU1 580 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 CHRNA1P02708 482 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 ABL2P42684 1182 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 SEC13P55735 322 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 TBCCQ15814 346 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 FAM83EQ2M2I3 478 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 BRMS1LQ5PSV4 323 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 BEND6Q5SZJ8 279 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 CEP68Q76N32 757 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 RAB23Q9ULC3 237 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 ZNF510Q9Y2H8 683 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 YIPF1Q9Y548 306 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 PTPRJQ12913 1337 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 HCRTO43612 131 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 PIGRP01833 764 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 GLI1P08151 1106 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 ADRA1BP35368 520 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 COG4Q9H9E3 785 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 CNTN3Q9P232 1028 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 TAF1P21675 1872 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 HACD1B0YJ81 288 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 TBX18O95935 607 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 ETS1P14921 441 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 PRLRP16471 622 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 MAP3K21Q5TCX8 1036 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 GRAMD4Q6IC98 578 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 RAB3IPQ96QF0 476 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 SHCBP1LQ9BZQ2 653 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 TMEM51Q9NW97 253 aa16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 KIAA1522Q9P206 1035 aaPredicted RBP16.06■□□□□ 0.16
PPFIA1-222ENST00000532504 PJA2O43164 708 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 POU4F1Q01851 419 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 CCNJLQ8IV13 435 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 MYO1HQ8N1T3 1032 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 TMEM175Q9BSA9 504 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 FAM167BQ9BTA0 163 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 MAN1C1Q9NR34 630 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 IFRD1O00458 451 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 PHEXP78562 749 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 MPPE1Q53F39 396 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 SLC45A4Q5BKX6 768 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 HHIPL1Q96JK4 782 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 NAT9Q9BTE0 207 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 ATP13A3Q9H7F0 1226 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 RNF112Q9ULX5 631 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 RCCD1A6NED2 376 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 CTPS1P17812 591 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 NFKB1P19838 968 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 PTK2BQ14289 1009 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 CIR1Q86X95 450 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 KLHL23Q8NBE8 558 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 BPIFA1Q9NP55 256 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 PCDHGB4Q9UN71 923 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 ALDH1A2O94788 518 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 NOL4O94818 638 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 COL6A1P12109 1028 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 EN2P19622 333 aaPredicted RBP16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 HDAC4P56524 1084 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 PFKPQ01813 784 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 MPP3Q13368 585 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 TRAPPC5Q8IUR0 188 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 USP6NLQ92738 828 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 C1QTNF7Q9BXJ2 289 aa16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 GNEQ9Y223 722 aaKnown RBP16.05■□□□□ 0.16
PPFIA1-222ENST00000532504 YJEFN3A6XGL0 299 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 E7ENQ6 273 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 CTSEP14091 401 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 STMN1P16949 149 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ELK3P41970 407 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 HSP90AA5PQ58FG0 334 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ANKRD20A2Q5SQ80 823 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ANKRD20A1Q5TYW2 823 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ARL8AQ96BM9 186 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ZNF212Q9UDV6 495 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 DMGDHQ9UI17 866 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TOGARAM1Q9Y4F4 1720 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 CBX2Q14781 532 aaPredicted RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 UBXN2BQ14CS0 331 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TPGS2Q68CL5 300 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 LINGO4Q6UY18 593 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TAC4Q86UU9 113 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 DIS3LQ8TF46 1054 aaKnown RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 CLEC4CQ8WTT0 213 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 VAT1Q99536 393 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 MLPHQ9BV36 600 aaPredicted RBP16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 WHRNQ9P202 907 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TMEM191CA6NGB0 347 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 EPHX1P07099 455 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 TACR2P21452 398 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 GPR15P49685 360 aa16.04■□□□□ 0.16
PPFIA1-222ENST00000532504 ARFIP2P53365 341 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms