RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 OR6B2Q6IFH4 312 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 OLFML1Q6UWY5 402 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 CFAP52Q8N1V2 620 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 ZCCHC9Q8N567 271 aaKnown RBP14.66□□□□□ -0.06
CAPN1-212ENST00000527887 ZNF366Q8N895 744 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 RNF34Q969K3 372 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 MYEOVQ96EZ4 313 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 PRMT1Q99873 361 aaKnown RBP14.66□□□□□ -0.06
CAPN1-212ENST00000527887 SYNCQ9H7C4 482 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 EIF2B4Q9UI10 523 aaKnown RBP14.66□□□□□ -0.06
CAPN1-212ENST00000527887 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.66□□□□□ -0.06
CAPN1-212ENST00000527887 PAXBP1Q9Y5B6 917 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 PCDHGB2Q9Y5G2 931 aa14.66□□□□□ -0.06
CAPN1-212ENST00000527887 EDDM13A0A1B0GTR0 161 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 A0A1B0GVM2 712 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 TCAF2A6NFQ2 919 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 F9P00740 461 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 PROS1P07225 676 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 CD27P26842 260 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 CDH5P33151 784 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-212ENST00000527887 MATKP42679 507 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 SIM1P81133 766 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-212ENST00000527887 APBA1Q02410 837 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 DPCR1Q3MIW9 517 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 MIIPQ5JXC2 388 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 BRMS1LQ5PSV4 323 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 C9orf64Q5T6V5 341 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 FAM124AQ86V42 546 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 SLC47A2Q86VL8 602 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 PASD1Q8IV76 773 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 PDCL3Q9H2J4 239 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 PABPC3Q9H361 631 aaKnown RBP14.65□□□□□ -0.06
CAPN1-212ENST00000527887 C6orf106Q9H6K1 298 aaPredicted RBP14.65□□□□□ -0.06
CAPN1-212ENST00000527887 XPO7Q9UIA9 1087 aaKnown RBP14.65□□□□□ -0.06
CAPN1-212ENST00000527887 FZD4Q9ULV1 537 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 PCDHB9Q9Y5E1 797 aa14.65□□□□□ -0.06
CAPN1-212ENST00000527887 TMEM8BA6NDV4 472 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 SIN3BO75182 1162 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 DAB1O75553 588 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 ADH1BP00325 375 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 GABRB2P47870 512 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 GRIA4P48058 902 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 PITX1P78337 314 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-212ENST00000527887 KCNJ12Q14500 433 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 DRAP1Q14919 205 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-212ENST00000527887 SUZ12Q15022 739 aaKnown RBP14.64□□□□□ -0.07
CAPN1-212ENST00000527887 CST6Q15828 149 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 C5orf22Q49AR2 442 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 KLHDC7AQ5VTJ3 777 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 DPY19L2P1Q6NXN4 242 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 FAM183BPQ6ZVS7 135 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 CACUL1Q86Y37 369 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 CCAR2Q8N163 923 aaKnown RBP14.64□□□□□ -0.07
CAPN1-212ENST00000527887 MSANTD4Q8NCY6 345 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 ENOX1Q8TC92 643 aaKnown RBP14.64□□□□□ -0.07
CAPN1-212ENST00000527887 PGAP3Q96FM1 320 aaPredicted RBP14.64□□□□□ -0.07
CAPN1-212ENST00000527887 FBXL12Q9NXK8 326 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 ADAMTS1Q9UHI8 967 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 STAP1Q9ULZ2 295 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 DAAM1Q9Y4D1 1078 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 NEUROG3Q9Y4Z2 214 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 CKAP5Q14008 2032 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 CACNA1BQ00975 2339 aa14.64□□□□□ -0.07
CAPN1-212ENST00000527887 PI4KAP42356 2102 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 CACNA1EQ15878 2313 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 GOLGA6L3A6NEY3 463 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 LRRC72A6NJI9 287 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 SH3BP5O60239 455 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 DFNA5O60443 496 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 CLDN11O75508 207 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 LSM8O95777 96 aaKnown RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 ERBB2P04626 1255 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 CYP11B1P15538 503 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 C5AR1P21730 350 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 ZNF177Q13360 481 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 AUHQ13825 339 aaKnown RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 ELAVL3Q14576 367 aaKnown RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 TRIP6Q15654 476 aaKnown RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 PTPN20Q4JDL3 420 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 TCP11X2Q5H9J9 407 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 KIAA0895LQ68EN5 471 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 FBXL22Q6P050 247 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 DBX2Q6ZNG2 339 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 MMS22LQ6ZRQ5 1243 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 SND1Q7KZF4 910 aaKnown RBP eCLIP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 GLRX5Q86SX6 157 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 NAXDQ8IW45 347 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 DHX40Q8IX18 779 aaKnown RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 APCDD1Q8J025 514 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 GANCQ8TET4 914 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 SNX19Q92543 992 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 NT5C3BQ969T7 300 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 SKA1Q96BD8 255 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 BIRC7Q96CA5 298 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 C18orf8Q96DM3 657 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 RPRD1AQ96P16 312 aaPredicted RBP14.63□□□□□ -0.07
CAPN1-212ENST00000527887 NPY6RQ99463 290 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 STK33Q9BYT3 514 aa14.63□□□□□ -0.07
CAPN1-212ENST00000527887 ADAM33Q9BZ11 813 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms