RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 KDELR1P24390 212 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 KIR2DL1P43626 348 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-205ENST00000527046 PLK1P53350 603 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 CDH4P55283 916 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 DPYSL3Q14195 570 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 EFHC2Q5JST6 749 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 ACBD5Q5T8D3 534 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-205ENST00000527046 AFMIDQ63HM1 303 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 PKN3Q6P5Z2 889 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 BMP8AQ7Z5Y6 402 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 PQLC3Q8N755 202 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 NETO2Q8NC67 525 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 PCDH19Q8TAB3 1148 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 KIAA1524Q8TCG1 905 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 HSPH1Q92598 858 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 ALG3Q92685 438 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 FAF2Q96CS3 445 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 MYO19Q96H55 970 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 RPRD1AQ96P16 312 aaPredicted RBP11.09□□□□□ -0.63
NEDD8-205ENST00000527046 PSMB7Q99436 277 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 TBC1D17Q9HA65 648 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 KCND1Q9NSA2 647 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 RBM12Q9NTZ6 932 aaKnown RBP11.09□□□□□ -0.63
NEDD8-205ENST00000527046 KLHL11Q9NVR0 708 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 TMEM248Q9NWD8 314 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 C2orf42Q9NWW7 574 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 LCMT1Q9UIC8 334 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 STARD13Q9Y3M8 1113 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 PCDHA3Q9Y5H8 950 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 BDP1A6H8Y1 2624 aa11.09□□□□□ -0.63
NEDD8-205ENST00000527046 MUC3AQ02505 3323 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 A0A0D9SEW6 157 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 A0A1B0GVM2 712 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 TCAF2A6NFQ2 919 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 TMEM221A6NGB7 291 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 M0R296 226 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 MAN2B1O00754 1011 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 DCLK1O15075 740 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 FANCGO15287 622 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CREB3O43889 395 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ZMPSTE24O75844 475 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CD160O95971 181 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 PTMAP06454 111 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 RHOQP17081 205 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ERCC2P18074 760 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CTNNA2P26232 953 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CTNNA1P35221 906 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 GRIA2P42262 883 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 DGKGP49619 791 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ADCY2Q08462 1091 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 HADHQ16836 314 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 PTPRNQ16849 979 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 AADACL2Q6P093 401 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 MFSD7Q6UXD7 560 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ZNF852Q6ZMS4 543 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 TFAP2DQ7Z6R9 452 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 DAAM2Q86T65 1068 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ARHGAP12Q8IWW6 846 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CCDC105Q8IYK2 499 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 C17orf53Q8N3J3 647 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CARNMT1Q8N4J0 409 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 NPWQ8N729 165 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 RTL3Q8N8U3 475 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 TTC17Q96AE7 1141 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 VOPP1Q96AW1 172 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 MSANTD3Q96H12 275 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 HES6Q96HZ4 224 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CALR3Q96L12 384 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CSPG4P5Q96PW8 444 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ACOX2Q99424 681 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 FEM1AQ9BSK4 669 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 OSBPL6Q9BZF3 934 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ZYG11BQ9C0D3 744 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 CD248Q9HCU0 757 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ARHGEF4Q9NR80 690 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 ABCB8Q9NUT2 735 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 DNAJC17Q9NVM6 304 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 POLR3BQ9NW08 1133 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 TRMT1Q9NXH9 659 aaKnown RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 DEC1Q9P2X7 70 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 FBXL21Q9UKT6 434 aa11.08□□□□□ -0.64
NEDD8-205ENST00000527046 PACSIN2Q9UNF0 486 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 MUC22E2RYF6 1773 aaPredicted RBP11.08□□□□□ -0.64
NEDD8-205ENST00000527046 A0A0C4DFX4 3053 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 FAM170BA6NMN3 283 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 KRT86O43790 486 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 CLDN11O75508 207 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 FTCDO95954 541 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 CYBBP04839 570 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 PABPC1P11940 636 aaKnown RBP11.07□□□□□ -0.64
NEDD8-205ENST00000527046 EPHB2P29323 1055 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 ACVRL1P37023 503 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 CSKP41240 450 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 CTSOP43234 321 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-205ENST00000527046 CDH6P55285 790 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 KDSRQ06136 332 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 SLC10A2Q12908 348 aaPredicted RBP11.07□□□□□ -0.64
NEDD8-205ENST00000527046 ENPP2Q13822 863 aa11.07□□□□□ -0.64
NEDD8-205ENST00000527046 PLEKHG6Q3KR16 790 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms